RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 C18orf25Q96B23 403 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 CBWD1Q9BRT8 395 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 GOLGA2P5Q9HBQ8 144 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 DZANK1Q9NVP4 752 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 BACE2Q9Y5Z0 518 aa11.74□□□□□ -0.53
GPATCH4-216ENST00000531900 ANO9A1A5B4 782 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 LOC730098B7Z3J9 87 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 M0QZQ0 153 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 PIRO00625 290 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 PLA2G5P39877 138 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 PLXNA3P51805 1871 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 RBM10P98175 930 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 ITIH3Q06033 890 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 CBX2Q14781 532 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 KNOP1Q1ED39 458 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 KMT5BQ4FZB7 885 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 CES5AQ6NT32 575 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 CYP26C1Q6V0L0 522 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 RTL10Q7L3V2 364 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 GPD1LQ8N335 351 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 KIAA0895Q8NCT3 520 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 CMASQ8NFW8 434 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 GOLGA5Q8TBA6 731 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 RIN2Q8WYP3 895 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 RPGRIP1Q96KN7 1286 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 CLSTN3Q9BQT9 956 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 SLC39A2Q9NP94 309 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 AGPAT3Q9NRZ7 376 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 TUBGCP4Q9UGJ1 667 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 MUTYHQ9UIF7 546 aa11.73□□□□□ -0.53
GPATCH4-216ENST00000531900 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 PDXKO00764 312 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 RPN1P04843 607 aaKnown RBP11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 EPCAMP16422 314 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 KLRC2P26717 231 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 MCCD1P59942 119 aaPredicted RBP11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 RAB33AQ14088 237 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 MYBPC2Q14324 1141 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 TMEM132DQ14C87 1099 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 SURF1Q15526 300 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 JADE1Q6IE81 842 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 SLC8B1Q6J4K2 584 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 ANKS3Q6ZW76 656 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 HS2ST1Q7LGA3 356 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 SLC9A9Q8IVB4 645 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 ZSWIM2Q8NEG5 633 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 BEST2Q8NFU1 509 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 HASPINQ8TF76 798 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 B3GALT6Q96L58 329 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 ADAM7Q9H2U9 754 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 EXOC1Q9NV70 894 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 HSPBP1Q9NZL4 362 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
GPATCH4-216ENST00000531900 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 C2CD2LO14523 706 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 OAZ2O95190 189 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 KIF20AO95235 890 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 GLUD1P00367 558 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 NFICP08651 508 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 BRCC3P46736 316 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 LILRA4P59901 499 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 SPAG1Q07617 926 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 PSMD5Q16401 504 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 NFIL3Q16649 462 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 C9orf57Q5W0N0 161 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 C15orf39Q6ZRI6 1047 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 EFCAB13Q8IY85 973 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 APPL2Q8NEU8 664 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 CXorf38Q8TB03 319 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 EDAQ92838 391 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 CCDC47Q96A33 483 aaKnown RBP11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 NECTIN4Q96NY8 510 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 KCTD10Q9H3F6 313 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 DMAC2Q9NW81 257 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 DPP3Q9NY33 737 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 TRAF3IP3Q9Y228 551 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 NR2E1Q9Y466 385 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 NUB1Q9Y5A7 615 aa11.71□□□□□ -0.53
GPATCH4-216ENST00000531900 MYO10Q9HD67 2058 aa11.71□□□□□ -0.54
GPATCH4-216ENST00000531900 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
GPATCH4-216ENST00000531900 C2orf16Q68DN1 1984 aa11.7□□□□□ -0.54
GPATCH4-216ENST00000531900 TGM5O43548 720 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms