RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 KIAA1549LQ6ZVL6 1849 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 MYH11P35749 1972 aa9.88□□□□□ -0.83
USF1-210ENST00000531842 OBSL1O75147 1896 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 THADAQ6YHU6 1953 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 MAN2B1O00754 1011 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TM4SF5O14894 197 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 ZNF263O14978 683 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 N4BP3O15049 544 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 SOAT2O75908 522 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 CTDNEP1O95476 244 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 ATP2B1P20020 1258 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 NRLP54845 237 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TNK2Q07912 1038 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 PTGDRQ13258 359 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 PCBP1Q15365 356 aaKnown RBP eCLIP9.87□□□□□ -0.83
USF1-210ENST00000531842 SEZ6Q53EL9 994 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 IL31Q6EBC2 164 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 RNF19BQ6ZMZ0 732 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
USF1-210ENST00000531842 RUFY3Q7L099 469 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 KBTBD6Q86V97 674 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 SMARCD2Q92925 531 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TNFRSF25Q93038 417 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 CCDC43Q96MW1 224 aaKnown RBP9.87□□□□□ -0.83
USF1-210ENST00000531842 PGLYRP2Q96PD5 576 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TMEM60Q9H2L4 133 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TTC12Q9H892 705 aaPredicted RBP9.87□□□□□ -0.83
USF1-210ENST00000531842 AVENQ9NQS1 362 aaPredicted RBP9.87□□□□□ -0.83
USF1-210ENST00000531842 PRMT7Q9NVM4 692 aaPredicted RBP9.87□□□□□ -0.83
USF1-210ENST00000531842 GTSE1Q9NYZ3 720 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 FBXL5Q9UKA1 691 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 PCDHA12Q9UN75 941 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TIMM13Q9Y5L4 95 aaPredicted RBP9.87□□□□□ -0.83
USF1-210ENST00000531842 BACE2Q9Y5Z0 518 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 DMXL2Q8TDJ6 3036 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 ZMYM2Q9UBW7 1377 aa9.87□□□□□ -0.83
USF1-210ENST00000531842 TSC2P49815 1807 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 ADAMTS9Q9P2N4 1935 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 ASCC3Q8N3C0 2202 aaKnown RBP9.86□□□□□ -0.83
USF1-210ENST00000531842 SMIM28A0A1B0GU29 152 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 A0A1W2PRU2 124 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 PODXLO00592 558 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 REC8O95072 547 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 LYPLA2O95372 231 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 ATF2P15336 505 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 GCFC2P16383 781 aaKnown RBP9.86□□□□□ -0.83
USF1-210ENST00000531842 ELF1P32519 619 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 KPNA1P52294 538 aaPredicted RBP9.86□□□□□ -0.83
USF1-210ENST00000531842 SPAG1Q07617 926 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 ELAVL2Q12926 359 aaKnown RBP9.86□□□□□ -0.83
USF1-210ENST00000531842 CALCRLQ16602 461 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 NAIF1Q69YI7 327 aaPredicted RBP9.86□□□□□ -0.83
USF1-210ENST00000531842 SLC8B1Q6J4K2 584 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 ANKS3Q6ZW76 656 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 LONP2Q86WA8 852 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 CATSPER3Q86XQ3 398 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 SPEM1Q8N4L4 309 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 TTC9BQ8N6N2 239 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 IRF7Q92985 503 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 SMG9Q9H0W8 520 aaKnown RBP9.86□□□□□ -0.83
USF1-210ENST00000531842 SLITRK6Q9H5Y7 841 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 GON4LQ3T8J9 2241 aa9.86□□□□□ -0.83
USF1-210ENST00000531842 CACNA1EQ15878 2313 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ANTXRLA6NF34 631 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 SPECC1L-ADORA2AF8WAN1 911 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 TMEM189-UBE2V1I3L0A0 370 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ACKR2O00590 384 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 DCLK1O15075 740 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 KCNK5O95279 499 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 HARSP12081 509 aaKnown RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 FDPSP14324 419 aaKnown RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 U2AF2P26368 475 aaKnown RBP eCLIP9.85□□□□□ -0.83
USF1-210ENST00000531842 ECM1Q16610 540 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 MAPK6Q16659 721 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 FAM187BQ17R55 369 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 CTXN3Q4LDR2 81 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 CYP4A22Q5TCH4 519 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 STPG1Q5TH74 334 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ATF7IP2Q5U623 682 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ERICH6BQ5W0A0 696 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 GALNT17Q6IS24 598 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 PSAPL1Q6NUJ1 521 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 PDXDC1Q6P996 788 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 MFSD6LQ8IWD5 586 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ZBTB8OSQ8IWT0 167 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 SLFN12Q8IYM2 578 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 TCEAL8Q8IYN2 117 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ZNF274Q96GC6 653 aaPredicted RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 BORCS6Q96GS4 357 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 ZBTB45Q96K62 511 aaPredicted RBP9.85□□□□□ -0.83
USF1-210ENST00000531842 PRIMPOLQ96LW4 560 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 LRRC3Q9BY71 257 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 DNAJC25Q9H1X3 360 aa9.85□□□□□ -0.83
USF1-210ENST00000531842 CDT1Q9H211 546 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms