RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RRAGAQ7L523 313 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.5■□□□□ 0.87
SMPD1-205ENST00000531303 PPFIBP1Q86W92 1011 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 ARHGEF19Q8IW93 802 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 HERVK_113Q902F9 699 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 HPDLQ96IR7 371 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 PAAF1Q9BRP4 392 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 IMPG2Q9BZV3 1241 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 HCSTQ9UBK5 93 aa20.5■□□□□ 0.87
SMPD1-205ENST00000531303 ITIH6Q6UXX5 1313 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 B4GALT3O60512 393 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 DGKIO75912 1065 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 NOL4O94818 638 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 DDHD2O94830 711 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 CLCNKBP51801 687 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 POLR2FP61218 127 aaKnown RBP20.49■□□□□ 0.87
SMPD1-205ENST00000531303 NOP14P78316 857 aaKnown RBP20.49■□□□□ 0.87
SMPD1-205ENST00000531303 TUSC3Q13454 348 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 SGSM1Q2NKQ1 1148 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 PHLDB3Q6NSJ2 640 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 APOBEC3GQ9HC16 384 aaKnown RBP20.49■□□□□ 0.87
SMPD1-205ENST00000531303 UBE2TQ9NPD8 197 aaPredicted RBP20.49■□□□□ 0.87
SMPD1-205ENST00000531303 NLRC4Q9NPP4 1024 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 NXF1Q9UBU9 619 aaKnown RBP20.49■□□□□ 0.87
SMPD1-205ENST00000531303 NUB1Q9Y5A7 615 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMPD1-205ENST00000531303 SLC4A7Q9Y6M7 1214 aa20.49■□□□□ 0.87
SMPD1-205ENST00000531303 PODXLO00592 558 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 ASS1P00966 412 aaKnown RBP20.48■□□□□ 0.87
SMPD1-205ENST00000531303 IGFBP6P24592 240 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-205ENST00000531303 GOLGA8FQ08AF8 430 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 GOLGA8DPQ0D2H9 430 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 PPM1KQ8N3J5 372 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 XYLT2Q9H1B5 865 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 GANQ9H2C0 597 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 PLCB1Q9NQ66 1216 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 APEX2Q9UBZ4 518 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 DNAJB4Q9UDY4 337 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 AJAP1Q9UKB5 411 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-205ENST00000531303 FHOD1Q9Y613 1164 aa20.48■□□□□ 0.87
SMPD1-205ENST00000531303 ANO9A1A5B4 782 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 PIRO00625 290 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 UCHL3P15374 230 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 LRPAP1P30533 357 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 OR1G1P47890 313 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 MYO1EQ12965 1108 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 RAPGEF1Q13905 1077 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 ARHGAP44Q17R89 818 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 WDR72Q3MJ13 1102 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 C9orf50Q5SZB4 431 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 IQCEQ6IPM2 695 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 SCARA5Q6ZMJ2 495 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 CACNA2D4Q7Z3S7 1137 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 KAT5Q92993 513 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 YME1L1Q96TA2 773 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 ZBED2Q9BTP6 218 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 NUP58Q9BVL2 599 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 MTIF3Q9H2K0 278 aaKnown RBP20.47■□□□□ 0.87
SMPD1-205ENST00000531303 NRDE2Q9H7Z3 1164 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 DNAJC12Q9UKB3 198 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 POLIQ9UNA4 740 aa20.47■□□□□ 0.87
SMPD1-205ENST00000531303 H0YGN5 161 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 RNF225M0QZC1 329 aaPredicted RBP20.46■□□□□ 0.87
SMPD1-205ENST00000531303 ZC3H11AO75152 810 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMPD1-205ENST00000531303 GYPCP04921 128 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 ATICP31939 592 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 CASP14P31944 242 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 ZNF667Q5HYK9 610 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 SPOUT1Q5T280 376 aaKnown RBP20.46■□□□□ 0.87
SMPD1-205ENST00000531303 GPIHBP1Q8IV16 184 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 COLGALT2Q8IYK4 626 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 LRRC43Q8N309 656 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 HASPINQ8TF76 798 aa20.46■□□□□ 0.87
SMPD1-205ENST00000531303 MRPL9Q9BYD2 267 aaKnown RBP20.46■□□□□ 0.87
SMPD1-205ENST00000531303 TPM1P09493 284 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 RPL9P32969 192 aaKnown RBP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 FXR1P51114 621 aaKnown RBP eCLIP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 DSC1Q08554 894 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 TBX2Q13207 712 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 BTG3Q14201 252 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 UPP1Q16831 310 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 LRRC52Q8N7C0 313 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 TAF4BQ92750 862 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 DDX27Q96GQ7 796 aaKnown RBP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 ZNF560Q96MR9 790 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 ARID3AQ99856 593 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 CEP72Q9P209 647 aa20.45■□□□□ 0.86
SMPD1-205ENST00000531303 PRG3Q9Y2Y8 225 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-205ENST00000531303 F8W810 466 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 SPTLC1O15269 473 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 B3GAT3O94766 335 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 ATP2A2P16615 1042 aaKnown RBP20.44■□□□□ 0.86
SMPD1-205ENST00000531303 PBX3P40426 434 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 TAF6P49848 677 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 ADKP55263 362 aaKnown RBP20.44■□□□□ 0.86
SMPD1-205ENST00000531303 TNNC1P63316 161 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 SHHQ15465 462 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 C3orf58Q8NDZ4 430 aa20.44■□□□□ 0.86
SMPD1-205ENST00000531303 ZNF689Q96CS4 500 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms