RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TLR1Q15399 786 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 KCNJ8Q15842 424 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PPP2R5EQ16537 467 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 TRMT5Q32P41 509 aaKnown RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 CLEC4GQ6UXB4 293 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 TMC7Q7Z402 723 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 DHDDSQ86SQ9 333 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 VPS36Q86VN1 386 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 MCF2L2Q86YR7 1114 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ANKMY2Q8IV38 441 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 FAM20CQ8IXL6 584 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 MARVELD2Q8N4S9 558 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 SH3RF3Q8TEJ3 882 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 ART4Q93070 314 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 EFHD2Q96C19 240 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-219ENST00000531050 NAPBQ9H115 298 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 NPHS2Q9NP85 383 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 RIC8AQ9NPQ8 531 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 MAD1L1Q9Y6D9 718 aa8.23□□□□□ -1.09
PTPRK-219ENST00000531050 PKD1L3Q7Z443 1732 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PCDH11YQ9BZA8 1340 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 TXNDC9O14530 226 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 TEX28O15482 410 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 DDX3YO15523 660 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ITM2AO43736 263 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 SPAG7O75391 227 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 DDX58O95786 925 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 TTLL1O95922 423 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 FGFR1P11362 822 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PEX2P28328 305 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 HIRAP54198 1017 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ARID5AQ03989 594 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 FOLH1Q04609 750 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ZBTB17Q13105 803 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 EFTUD2Q15029 972 aaKnown RBP eCLIP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ARHGEF6Q15052 776 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 GPR162Q16538 588 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PDK4Q16654 411 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 NDUFA5Q16718 116 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 WDR45BQ5MNZ6 344 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 EPM2AIP1Q7L775 607 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CCDC25Q86WR0 208 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 GRAMD2AQ8IUY3 354 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ALLCQ8N6M5 410 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 RNF169Q8NCN4 708 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 FBXO27Q8NI29 283 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF398Q8TD17 642 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 LRRC15Q8TF66 581 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 TNFRSF25Q93038 417 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 C18orf8Q96DM3 657 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PUS7LQ9H0K6 701 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 EHD1Q9H4M9 534 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 SIAEQ9HAT2 523 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 TBC1D23Q9NUY8 699 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 THEGQ9P2T0 379 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 SEL1LQ9UBV2 794 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PARP2Q9UGN5 583 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 KLHL3Q9UH77 587 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ADAMTS6Q9UKP5 1117 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 MTUS1Q9ULD2 1270 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 GLI3P10071 1580 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 AFDNP55196 1824 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF536O15090 1300 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CYTH3O43739 400 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 TCEA3O75764 348 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 BAIAP3O94812 1187 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CHRNB1P11230 501 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ALAS1P13196 640 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 EEF2P13639 858 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 KRT2P35908 639 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CETN2P41208 172 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 LIFRP42702 1097 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 MXI1P50539 228 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 GPC3P51654 580 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 AIMP1Q12904 312 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 KRT81Q14533 505 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 SF3B4Q15427 424 aaKnown RBP eCLIP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 RTN1Q16799 776 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 USP41Q3LFD5 358 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 SPERTQ8NA61 448 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 RFWD2Q8NHY2 731 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CHPT1Q8WUD6 406 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 USP6NLQ92738 828 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CDK5RAP3Q96JB5 506 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 CLPTM1LQ96KA5 538 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 PRPF18Q99633 342 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 IRF2BPLQ9H1B7 796 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ZNF696Q9H7X3 374 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 S100A14Q9HCY8 104 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 DISC1Q9NRI5 854 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 HOXC10Q9NYD6 342 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 RSL24D1Q9UHA3 163 aaKnown RBP8.22□□□□□ -1.09
PTPRK-219ENST00000531050 NAALADL1Q9UQQ1 740 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
PTPRK-219ENST00000531050 LAMB4A4D0S4 1761 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms