RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 FNIP2Q9P278 1114 aa20.31■□□□□ 0.84
GMDS-208ENST00000530927 TIMM13Q9Y5L4 95 aaPredicted RBP20.31■□□□□ 0.84
GMDS-208ENST00000530927 SPTLC1O15269 473 aa20.3■□□□□ 0.84
GMDS-208ENST00000530927 EXTL3O43909 919 aa20.3■□□□□ 0.84
GMDS-208ENST00000530927 DPYDQ12882 1025 aa20.3■□□□□ 0.84
GMDS-208ENST00000530927 ELAVL2Q12926 359 aaKnown RBP20.3■□□□□ 0.84
GMDS-208ENST00000530927 SNW1Q13573 536 aaKnown RBP20.3■□□□□ 0.84
GMDS-208ENST00000530927 VARS2Q5ST30 1063 aaKnown RBP20.3■□□□□ 0.84
GMDS-208ENST00000530927 LMBRD2Q68DH5 695 aaPredicted RBP20.3■□□□□ 0.84
GMDS-208ENST00000530927 BRSK2Q8IWQ3 736 aa20.3■□□□□ 0.84
GMDS-208ENST00000530927 HSPBP1Q9NZL4 362 aa20.3■□□□□ 0.84
GMDS-208ENST00000530927 PTPRJQ12913 1337 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 TNFRSF10AO00220 468 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 HOXB8P17481 243 aaPredicted RBP20.29■□□□□ 0.84
GMDS-208ENST00000530927 CYP3A5P20815 502 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 CYP2J2P51589 502 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 BMT2Q1RMZ1 405 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 LILRA6Q6PI73 481 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 GPD1LQ8N335 351 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 RDH13Q8NBN7 331 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 ENGASEQ8NFI3 743 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 BEST2Q8NFU1 509 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 SUSD3Q96L08 255 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 ADAM7Q9H2U9 754 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 ASB7Q9H672 318 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 PDE11AQ9HCR9 933 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.29■□□□□ 0.84
GMDS-208ENST00000530927 DZANK1Q9NVP4 752 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 MTRRQ9UBK8 725 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 CDY1Q9Y6F8 540 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 BDP1A6H8Y1 2624 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 C2orf16Q68DN1 1984 aa20.29■□□□□ 0.84
GMDS-208ENST00000530927 UBE4BO95155 1302 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 GOLGA6L4A6NEF3 574 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 SPDYE4A6NLX3 237 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 SSTR3P32745 418 aaPredicted RBP20.28■□□□□ 0.84
GMDS-208ENST00000530927 OR1D2P34982 312 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 PNOCQ13519 176 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 CBX2Q14781 532 aaPredicted RBP20.28■□□□□ 0.84
GMDS-208ENST00000530927 ADHFE1Q8IWW8 467 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 CD302Q8IX05 232 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 POMKQ9H5K3 350 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 DPP3Q9NY33 737 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 FAM50BQ9Y247 325 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 SCN1AP35498 2009 aa20.28■□□□□ 0.84
GMDS-208ENST00000530927 IL18RAPO95256 599 aa20.27■□□□□ 0.84
GMDS-208ENST00000530927 TFAMQ00059 246 aaKnown RBP20.27■□□□□ 0.84
GMDS-208ENST00000530927 KNOP1Q1ED39 458 aaKnown RBP20.27■□□□□ 0.84
GMDS-208ENST00000530927 GJD3Q8N144 294 aa20.27■□□□□ 0.84
GMDS-208ENST00000530927 RPGRIP1Q96KN7 1286 aa20.27■□□□□ 0.84
GMDS-208ENST00000530927 MAPK8IP1Q9UQF2 711 aa20.27■□□□□ 0.84
GMDS-208ENST00000530927 DERAQ9Y315 318 aa20.27■□□□□ 0.84
GMDS-208ENST00000530927 C2CD2Q9Y426 696 aa20.27■□□□□ 0.84
GMDS-208ENST00000530927 ANO9A1A5B4 782 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 PIRO00625 290 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 XPOTO43592 962 aaKnown RBP20.27■□□□□ 0.83
GMDS-208ENST00000530927 LDHAP00338 332 aaKnown RBP20.27■□□□□ 0.83
GMDS-208ENST00000530927 AARSP49588 968 aaKnown RBP eCLIP20.27■□□□□ 0.83
GMDS-208ENST00000530927 ARPP19P56211 112 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 LILRA4P59901 499 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 GPR65Q8IYL9 337 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 SMYD4Q8IYR2 804 aaPredicted RBP20.27■□□□□ 0.83
GMDS-208ENST00000530927 KREMEN2Q8NCW0 462 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 SFXN1Q9H9B4 322 aa20.27■□□□□ 0.83
GMDS-208ENST00000530927 TSC2P49815 1807 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 CCDC195A0A1B0GUA6 201 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 C19orf67A6NJJ6 358 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 CDR1P51861 262 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 CREMQ03060 361 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 MRPL58Q14197 206 aaKnown RBP20.26■□□□□ 0.83
GMDS-208ENST00000530927 CES5AQ6NT32 575 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 DSTYKQ6XUX3 929 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 ANKS3Q6ZW76 656 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 C1orf127Q8N9H9 656 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 OR5B17Q8NGF7 314 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 MTMR12Q9C0I1 747 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 KCTD10Q9H3F6 313 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 PRKAG3Q9UGI9 489 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 FBXW11Q9UKB1 542 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 PCDHB8Q9UN66 801 aa20.26■□□□□ 0.83
GMDS-208ENST00000530927 MTCL1Q9Y4B5 1905 aaKnown RBP20.25■□□□□ 0.83
GMDS-208ENST00000530927 M0QZQ0 153 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 SYN3O14994 580 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 TBC1D4O60343 1298 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 RHOBTB3O94955 611 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 MYL1P05976 194 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 POLR2BP30876 1174 aaKnown RBP20.25■□□□□ 0.83
GMDS-208ENST00000530927 FAM160A1Q05DH4 1040 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 ITIH3Q06033 890 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 RAB33AQ14088 237 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 SNRNP35Q16560 246 aaKnown RBP20.25■□□□□ 0.83
GMDS-208ENST00000530927 GPR149Q86SP6 731 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 CXorf38Q8TB03 319 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 ZNF707Q96C28 371 aaPredicted RBP20.25■□□□□ 0.83
GMDS-208ENST00000530927 TSPAN18Q96SJ8 248 aa20.25■□□□□ 0.83
GMDS-208ENST00000530927 POP1Q99575 1024 aaKnown RBP20.25■□□□□ 0.83
GMDS-208ENST00000530927 PHF7Q9BWX1 381 aaPredicted RBP20.25■□□□□ 0.83
GMDS-208ENST00000530927 FBXL5Q9UKA1 691 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms