RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 IL18RAPO95256 599 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 MCM4P33991 863 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 KANK3Q6NY19 840 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 LILRA6Q6PI73 481 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 TMC5Q6UXY8 1006 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 ZSWIM2Q8NEG5 633 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 BEST2Q8NFU1 509 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 SCFD1Q8WVM8 642 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 SUSD3Q96L08 255 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 NECTIN4Q96NY8 510 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 PLEKHA4Q9H4M7 779 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 SLC39A2Q9NP94 309 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 MTRRQ9UBK8 725 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 CDH22Q9UJ99 828 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 BACE2Q9Y5Z0 518 aa16.21■□□□□ 0.19
PPFIA1-216ENST00000530746 EXTL3O43909 919 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 SPATA31D3P0C874 917 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 MTHFRP42898 656 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 GUCY2FP51841 1108 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 ATAT1Q5SQI0 421 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 KRBA2Q6ZNG9 492 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 SPATA31D4Q6ZUB0 917 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 GPR149Q86SP6 731 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 NT5DC4Q86YG4 428 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 BRSK2Q8IWQ3 736 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 RIPOR3Q96MK2 946 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 PCIF1Q9H4Z3 704 aa16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 RBAKQ9NYW8 714 aaPredicted RBP16.2■□□□□ 0.18
PPFIA1-216ENST00000530746 GOLGA8IPA6NC78 632 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 GOLGA8JA6NMD2 632 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 LOC730098B7Z3J9 87 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 M0QZQ0 153 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 ADAM12O43184 909 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 TGFB1I1O43294 461 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 ZNF202O95125 648 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 WEE2P0C1S8 567 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 OR1D2P34982 312 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 SNRPFP62306 86 aaKnown RBP16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 PSMD2Q13200 908 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 RAB33AQ14088 237 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 BMT2Q1RMZ1 405 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 KMT5BQ4FZB7 885 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 VARS2Q5ST30 1063 aaKnown RBP16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 C9orf57Q5W0N0 161 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 C15orf39Q6ZRI6 1047 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 GPD1LQ8N335 351 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 CMASQ8NFW8 434 aaPredicted RBP16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 POMKQ9H5K3 350 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 EXOC1Q9NV70 894 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 PCDHB8Q9UN66 801 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 CDY1Q9Y6F8 540 aa16.19■□□□□ 0.18
PPFIA1-216ENST00000530746 CCDC195A0A1B0GUA6 201 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 ANO9A1A5B4 782 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 PIRO00625 290 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 PAX3P23760 479 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 WNT7BP56706 349 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 STK4Q13043 487 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 MRPL58Q14197 206 aaKnown RBP16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 RSPO2Q6UXX9 243 aaPredicted RBP16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 CYP26C1Q6V0L0 522 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 NELFCDQ8IXH7 590 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 EFCAB13Q8IY85 973 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 APPL2Q8NEU8 664 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 FEZF2Q8TBJ5 459 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 RPGRIP1Q96KN7 1286 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 AGPAT3Q9NRZ7 376 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 DPP3Q9NY33 737 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 HSPBP1Q9NZL4 362 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 FBXW11Q9UKB1 542 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 DOCK6Q96HP0 2047 aa16.18■□□□□ 0.18
PPFIA1-216ENST00000530746 TSC2P49815 1807 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 H7C4K7 107 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 PPEF2O14830 753 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 TBC1D4O60343 1298 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 RFPL2O75678 378 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 PAPLNO95428 1278 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 RPN1P04843 607 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 LILRA4P59901 499 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 DPYDQ12882 1025 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 KNOP1Q1ED39 458 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 SLC8B1Q6J4K2 584 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 DSTYKQ6XUX3 929 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 HS2ST1Q7LGA3 356 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 KIAA0895Q8NCT3 520 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.182e-8■□□□□ 10.5
PPFIA1-216ENST00000530746 CCDC34Q96HJ3 373 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 IPO9Q96P70 1041 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 RHOBTB2Q9BYZ6 727 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 KIAA1586Q9HCI6 787 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 ZDHHC7Q9NXF8 308 aa16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 CGNQ9P2M7 1197 aaKnown RBP16.17■□□□□ 0.18
PPFIA1-216ENST00000530746 TRIOO75962 3097 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms