RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ZNF263O14978 683 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 MICAL2O94851 1124 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 PRKCBP05771 671 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 TDGF1P13385 188 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 LIG1P18858 919 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 ATP2B1P20020 1258 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 TKTP29401 623 aaKnown RBP9.9□□□□□ -0.82
VPS11-203ENST00000529545 GDI1P31150 447 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 ARPP19P56211 112 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 TOB2Q14106 344 aaPredicted RBP9.9□□□□□ -0.82
VPS11-203ENST00000529545 LRRC32Q14392 662 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 CALCRLQ16602 461 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 DCAF4L1Q3SXM0 396 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 FAM78AQ5JUQ0 283 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 C1orf228Q6PIY5 440 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 PRR23CQ6ZRP0 262 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 YAF2Q8IY57 180 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 CSGALNACT1Q8TDX6 532 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 DEPDC1BQ8WUY9 529 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 SMARCD2Q92925 531 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 ZNF512Q96ME7 567 aaPredicted RBP9.9□□□□□ -0.82
VPS11-203ENST00000529545 CYP4F11Q9HBI6 524 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 ZNF334Q9HCZ1 680 aaPredicted RBP9.9□□□□□ -0.82
VPS11-203ENST00000529545 TRPV5Q9NQA5 729 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 ANGPTL2Q9UKU9 493 aa9.9□□□□□ -0.82
VPS11-203ENST00000529545 MAP1BP46821 2468 aaKnown RBP9.89□□□□□ -0.83
VPS11-203ENST00000529545 H7C4K7 107 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 ACKR2O00590 384 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 ATF2P15336 505 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 TXKP42681 527 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 CLCNKBP51801 687 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
VPS11-203ENST00000529545 PRSS12P56730 875 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 SATB1Q01826 763 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 ROR1Q01973 937 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 PPP2R5AQ15172 486 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 NAB2Q15742 525 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 TPGS2Q68CL5 300 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 CDCA2Q69YH5 1023 aaPredicted RBP9.89□□□□□ -0.83
VPS11-203ENST00000529545 SLC8B1Q6J4K2 584 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 CEP68Q76N32 757 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 LONP2Q86WA8 852 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 MAP4K3Q8IVH8 894 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 TCEAL8Q8IYN2 117 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 SPEM1Q8N4L4 309 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 LEMD2Q8NC56 503 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 DEPTORQ8TB45 409 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 FAM200AQ8TCP9 573 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 E2F7Q96AV8 911 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 MSANTD3Q96H12 275 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 ZFRQ96KR1 1074 aaKnown RBP9.89□□□□□ -0.83
VPS11-203ENST00000529545 ASB16Q96NS5 453 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 GPR88Q9GZN0 384 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 TTC12Q9H892 705 aaPredicted RBP9.89□□□□□ -0.83
VPS11-203ENST00000529545 GPRC5CQ9NQ84 441 aa9.89□□□□□ -0.83
VPS11-203ENST00000529545 STK36Q9NRP7 1315 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 TICRRQ7Z2Z1 1910 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 WDR27A2RRH5 827 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 SHISA7A6NL88 538 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 CHURC1-FNTBB4DL54 471 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 I3L4J1 428 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 SYN3O14994 580 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 ABLIM3O94929 683 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 FCARP24071 287 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 CCNE1P24864 410 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 KRT2P35908 639 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 BRCC3P46736 316 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 FNTBP49356 437 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 KPNA1P52294 538 aaPredicted RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 EFNA5P52803 228 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 MLLT6P55198 1093 aaPredicted RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 UPP1Q16831 310 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 AASDHQ4L235 1098 aaPredicted RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 GLRA4Q5JXX5 417 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 PRSS36Q5K4E3 855 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 HEATR6Q6AI08 1181 aaKnown RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 C12orf50Q8NA57 414 aaPredicted RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 WASF1Q92558 559 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 TCEAL4Q96EI5 215 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 IFT74Q96LB3 600 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 PPP1R10Q96QC0 940 aaKnown RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 NACC1Q96RE7 527 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 SLITRK6Q9H5Y7 841 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 C8orf33Q9H7E9 229 aaPredicted RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 TOPORSQ9NS56 1045 aaPredicted RBP9.88□□□□□ -0.83
VPS11-203ENST00000529545 SLC38A7Q9NVC3 462 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 NUB1Q9Y5A7 615 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 INSL5Q9Y5Q6 135 aa9.88□□□□□ -0.83
VPS11-203ENST00000529545 CHD8Q9HCK8 2581 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 A0A087WWV3 80 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 ARHGEF35A5YM69 484 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 NEMFO60524 1076 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 CHRNB1P11230 501 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 MYL4P12829 197 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 NAMPTP43490 491 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 CTXN3Q4LDR2 81 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 DGKKQ5KSL6 1271 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 ATF7IP2Q5U623 682 aa9.87□□□□□ -0.83
VPS11-203ENST00000529545 EEF1DP3Q658K8 133 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms