RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 MED16Q9Y2X0 877 aa3□□□□□ -1.93
FDFT1-216ENST00000529521 CHTOPQ9Y3Y2 248 aaKnown RBP3□□□□□ -1.93
FDFT1-216ENST00000529521 PTCH2Q9Y6C5 1203 aa3□□□□□ -1.93
FDFT1-216ENST00000529521 AK5Q9Y6K8 562 aa3□□□□□ -1.93
FDFT1-216ENST00000529521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3□□□□□ -1.93
FDFT1-216ENST00000529521 RPRD2Q5VT52 1461 aaKnown RBP3□□□□□ -1.93
FDFT1-216ENST00000529521 IBTKQ9P2D0 1353 aaPredicted RBP3□□□□□ -1.93
FDFT1-216ENST00000529521 WDR19Q8NEZ3 1342 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 LOC100289279A0A1B0GTE1 492 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 IQANK1A0A1B0GTG1 560 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 A0A1W2PP55 124 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ZNF503-AS2A6NEH8 195 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TRIM75PA6NK02 468 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 C16orf96A6NNT2 1141 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 B4DLN1 442 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 K7EPI3 171 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 M0R2C6 588 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GABRDO14764 452 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 IKBKBO14920 756 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 HDAC3O15379 428 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TLR3O15455 904 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 POLR2DO15514 142 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 PDPK1O15530 556 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TXNL1O43396 289 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ATP8B1O43520 1251 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 STRNO43815 780 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GRIN3BO60391 1043 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ACSL4O60488 711 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MAFKO60675 156 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SMPD2O60906 423 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SRGAP2O75044 1071 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TBC1D8O95759 1140 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 PLATP00750 562 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 POLR2MP0CAP2 368 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CD8BP10966 210 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 COL6A2P12110 1019 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 VAV1P15498 845 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CDH3P22223 829 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 IL10P22301 178 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 FGFR4P22455 802 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MCM4P33991 863 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 EVI2BP34910 448 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RFC4P35249 363 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GCKP35557 465 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ABCG1P45844 678 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ACADSBP45954 432 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 IFNAR2P48551 515 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MAPKAPK2P49137 400 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ALDH3A2P51648 485 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GPC3P51654 580 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 ARHGDIBP52566 201 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RARSP54136 660 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 PMS2P54278 862 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 OXCT1P55809 520 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TUBA4AP68366 448 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RPP38P78345 283 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GSTO1P78417 241 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CYP27A1Q02318 531 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 EXOSC9Q06265 439 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TMEM62Q0P6H9 643 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 C19orf57Q0VDD7 668 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CUL2Q13617 745 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 BYSLQ13895 437 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RASGRF1Q13972 1273 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MXD4Q14582 209 aaPredicted RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 NAA25Q14CX7 972 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 STK38Q15208 465 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MAPRE2Q15555 327 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SNCBQ16143 134 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GPR162Q16538 588 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MAPKAPK3Q16644 382 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 PTPN21Q16825 1174 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CCDC57Q2TAC2 916 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CWF19L2Q2TBE0 894 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 Q3ZCU0 254 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CYP27C1Q4G0S4 372 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CEP78Q5JTW2 689 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 GPR158Q5T848 1215 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RNASEH2BQ5TBB1 312 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 NDUFAF5Q5TEU4 345 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TWF2Q6IBS0 349 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TTBK2Q6IQ55 1244 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RPUSD3Q6P087 351 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MIS18BP1Q6P0N0 1132 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 NXPE4Q6UWF7 544 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 HHIPL2Q6UWX4 724 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SYT10Q6XYQ8 523 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 RGS9BPQ6ZS82 235 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 NLRP9Q7RTR0 991 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 KIAA1328Q86T90 577 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 CAND1Q86VP6 1230 aaKnown RBP2.99□□□□□ -1.93
FDFT1-216ENST00000529521 NOSTRINQ8IVI9 506 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 P3H2Q8IVL5 708 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SLC15A3Q8IY34 581 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 TXLNBQ8N3L3 684 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SYNPOQ8N3V7 929 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 MYCT1Q8N699 235 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 AVL9Q8NBF6 648 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 XXYLT1Q8NBI6 393 aa2.99□□□□□ -1.93
FDFT1-216ENST00000529521 SLC4A11Q8NBS3 891 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms