RNA–Protein interactions for RNA: ENST00000529229.1

AP003390.2-201, humanhuman

TSL 4 BASIC

Gene AP003390.2, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003390.2-201ENST00000529229 C1orf220Q5T0J3 134 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 C9orf57Q5W0N0 161 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 LMBRD2Q68DH5 695 aaPredicted RBP12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 SLC9A9Q8IVB4 645 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 CD302Q8IX05 232 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 GPR65Q8IYL9 337 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 GUF1Q8N442 669 aaKnown RBP12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 ATXN2LQ8WWM7 1075 aaKnown RBP12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 ASB2Q96Q27 587 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 CDCA3Q99618 268 aaPredicted RBP12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 CLSTN3Q9BQT9 956 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 MAN1B1Q9UKM7 699 aa12.11□□□□□ -0.47
AP003390.2-201ENST00000529229 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 PDXKO00764 312 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 KIAA0391O15091 583 aaKnown RBP12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 TADA2AO75478 443 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 IL18RAPO95256 599 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 SNRPFP62306 86 aaKnown RBP12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 CYP24A1Q07973 514 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 MRPL58Q14197 206 aaKnown RBP12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 CLUL1Q15846 466 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 NFIL3Q16649 462 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 LLGL2Q6P1M3 1020 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 LILRA6Q6PI73 481 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 ZC3H3Q8IXZ2 948 aaKnown RBP12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 RIN2Q8WYP3 895 aaPredicted RBP12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 TSPAN18Q96SJ8 248 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 TTPALQ9BTX7 342 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 S1PR5Q9H228 398 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 MTRRQ9UBK8 725 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 STK39Q9UEW8 545 aa12.1□□□□□ -0.47
AP003390.2-201ENST00000529229 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 MBTPS2O43462 519 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 VNN2O95498 520 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 NR3C1P04150 777 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 PRCPP42785 496 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 LILRA4P59901 499 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 MCCD1P59942 119 aaPredicted RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 CLDN10P78369 228 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 MORC3Q14149 939 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 PSMD6Q15008 389 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 PSMD5Q16401 504 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 ZNF658Q5TYW1 1059 aaPredicted RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 ANKRD54Q6NXT1 300 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 HS2ST1Q7LGA3 356 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 XXYLT1Q8NBI6 393 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 GPT2Q8TD30 523 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 SUSD6Q92537 303 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 NECAB3Q96P71 396 aaPredicted RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 RTP3Q9BQQ7 232 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 INTS13Q9NVM9 706 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 DPP3Q9NY33 737 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 FNIP2Q9P278 1114 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 CGNQ9P2M7 1197 aaKnown RBP12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 PATJQ8NI35 1801 aa12.09□□□□□ -0.47
AP003390.2-201ENST00000529229 TRIM49BA6NDI0 452 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 ZNF233A6NK53 670 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 TGM5O43548 720 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 NCK2O43639 380 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 AKAP3O75969 853 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 ITGB3P05106 788 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 POLR2BP30876 1174 aaKnown RBP12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 MCM4P33991 863 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 NDUFV1P49821 464 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 DLG4P78352 724 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 MRPS5P82675 430 aaKnown RBP12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 ELAVL2Q12926 359 aaKnown RBP12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 CENPPQ6IPU0 288 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 SLC8B1Q6J4K2 584 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 NT5DC4Q86YG4 428 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 ADSSL1Q8N142 457 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 BEST2Q8NFU1 509 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 SMARCE1Q969G3 411 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 MED15Q96RN5 788 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 CGRRF1Q99675 332 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 FBXW11Q9UKB1 542 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 PCDHB8Q9UN66 801 aa12.08□□□□□ -0.48
AP003390.2-201ENST00000529229 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
AP003390.2-201ENST00000529229 LRRIQ3A6PVS8 624 aaPredicted RBP12.07□□□□□ -0.48
AP003390.2-201ENST00000529229 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
AP003390.2-201ENST00000529229 SYN3O14994 580 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms