RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
CAPN1-217ENST00000529133 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
CAPN1-217ENST00000529133 CD300LGQ6UXG3 332 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 LRRC52Q8N7C0 313 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 COLGALT1Q8NBJ5 622 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 C3orf58Q8NDZ4 430 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 FBXL13Q8NEE6 735 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 CLP1Q92989 425 aaKnown RBP12.34□□□□□ -0.43
CAPN1-217ENST00000529133 ZNF560Q96MR9 790 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 ZNF558Q96NG5 402 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 PBX4Q9BYU1 374 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 XYLT2Q9H1B5 865 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
CAPN1-217ENST00000529133 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-217ENST00000529133 A0A1B0GTH6 734 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 A0A1W2PPC1 479 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 TMEM189-UBE2V1I3L0A0 370 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 LRRN2O75325 713 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-217ENST00000529133 ALDH2P05091 517 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 ITGB1P05556 798 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 CA3P07451 260 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 FILIP1LQ4L180 1135 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 DCLRE1AQ6PJP8 1040 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 KCNT2Q6UVM3 1135 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 TMEM173Q86WV6 379 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-217ENST00000529133 SLC39A11Q8N1S5 342 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 BCL7CQ8WUZ0 217 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-217ENST00000529133 NAP1L5Q96NT1 182 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-217ENST00000529133 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.44
CAPN1-217ENST00000529133 NKX2-4Q9H2Z4 354 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
CAPN1-217ENST00000529133 RAB20Q9NX57 234 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 IFNKQ9P0W0 207 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 MSRAQ9UJ68 235 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
CAPN1-217ENST00000529133 GTPBP10A4D1E9 387 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 NT5C1B-RDH14C9J2C7 533 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 SPTLC1O15269 473 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 TEX33O43247 280 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 AP5Z1O43299 807 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 B3GAT3O94766 335 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 ASS1P00966 412 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 ATICP31939 592 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 PNPLA4P41247 253 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 ALDH7A1P49419 539 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 AARSP49588 968 aaKnown RBP eCLIP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 TAF6P49848 677 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 UBASH3AP57075 661 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 SMAD3P84022 425 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 TAP1Q03518 808 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 UBXN1Q04323 297 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 CETN1Q12798 172 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 UVSSAQ2YD98 709 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 SV2CQ496J9 727 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 GBP6Q6ZN66 633 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 HASPINQ8TF76 798 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 ELMO3Q96BJ8 720 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 IGSF21Q96ID5 467 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 HPDLQ96IR7 371 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.442e-14■■■■■ 49.7
CAPN1-217ENST00000529133 AAASQ9NRG9 546 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
CAPN1-217ENST00000529133 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
CAPN1-217ENST00000529133 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 CARNS1A5YM72 827 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 I3L4J1 428 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 CLSTN1O94985 981 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 PON1P27169 355 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 CTNNB1P35222 781 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 PPM1AP35813 382 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 BMPR1AP36894 532 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 BRCC3P46736 316 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 LILRA4P59901 499 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
CAPN1-217ENST00000529133 KCNMA1Q12791 1236 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 MYO1EQ12965 1108 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 NR1I3Q14994 352 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 SYCP1Q15431 976 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 EXOC3L4Q17RC7 722 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 SGSM1Q2NKQ1 1148 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 TAF4BQ92750 862 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 IMPG2Q9BZV3 1241 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 XPO4Q9C0E2 1151 aaKnown RBP12.31□□□□□ -0.44
CAPN1-217ENST00000529133 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
CAPN1-217ENST00000529133 SPG21Q9NZD8 308 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms