RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 PCDHGA8Q9Y5G5 932 aa5.47□□□□□ -1.53
GEN1-204ENST00000528873 PCDHGA7Q9Y5G6 932 aa5.47□□□□□ -1.53
GEN1-204ENST00000528873 PCDHGA6Q9Y5G7 932 aa5.47□□□□□ -1.53
GEN1-204ENST00000528873 PCDHGA3Q9Y5H0 932 aa5.47□□□□□ -1.53
GEN1-204ENST00000528873 SHTN1A0MZ66 631 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 GRM6O15303 877 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 HTRA2O43464 458 aaPredicted RBP5.46□□□□□ -1.54
GEN1-204ENST00000528873 HAUS5O94927 633 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 AGFG2O95081 481 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 SLC6A4P31645 630 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 PTH2RP49190 550 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 SLFN5Q08AF3 891 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 MTMR1Q13613 665 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 IL10RAQ13651 578 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 FAM50AQ14320 339 aaKnown RBP5.46□□□□□ -1.54
GEN1-204ENST00000528873 ZNF169Q14929 603 aaPredicted RBP5.46□□□□□ -1.54
GEN1-204ENST00000528873 GEN1Q17RS7 908 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 PABPC1LQ4VXU2 614 aaKnown RBP5.46□□□□□ -1.54
GEN1-204ENST00000528873 FBXO42Q6P3S6 717 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 MTMR8Q96EF0 704 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 BBC3Q96PG8 261 aaPredicted RBP5.46□□□□□ -1.54
GEN1-204ENST00000528873 RSAD1Q9HA92 442 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 LRIT1Q9P2V4 623 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 TLK1Q9UKI8 766 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 LIMCH1Q9UPQ0 1083 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 IPPQ9Y573 584 aa5.46□□□□□ -1.54
GEN1-204ENST00000528873 CCDC154A6NI56 674 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 ZFPL1O95159 310 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 SBK3P0C264 359 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 FCER1AP12319 257 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 RARRES1P49788 294 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 CDKN1CP49918 316 aaPredicted RBP5.45□□□□□ -1.54
GEN1-204ENST00000528873 ZNF280AP59817 542 aaPredicted RBP5.45□□□□□ -1.54
GEN1-204ENST00000528873 KIF23Q02241 960 aaPredicted RBP5.45□□□□□ -1.54
GEN1-204ENST00000528873 PCBP2Q15366 365 aaKnown RBP eCLIP5.45□□□□□ -1.54
GEN1-204ENST00000528873 PPP4R3AQ6IN85 833 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 GADL1Q6ZQY3 521 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 RD3Q7Z3Z2 195 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 PNMA8AQ86V59 439 aaPredicted RBP5.45□□□□□ -1.54
GEN1-204ENST00000528873 IL17RDQ8NFM7 739 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 IFI44Q8TCB0 444 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 COA7Q96BR5 231 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 CLPTM1LQ96KA5 538 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 DUSP26Q9BV47 211 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 KIAA1586Q9HCI6 787 aa5.45□□□□□ -1.54
GEN1-204ENST00000528873 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 SGTAO43765 313 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 KATNA1O75449 491 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 MRPS35P82673 323 aaKnown RBP5.44□□□□□ -1.54
GEN1-204ENST00000528873 FPGSQ05932 587 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 RAB39AQ14964 217 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 EFCAB2Q5VUJ9 269 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 SP5Q6BEB4 398 aaPredicted RBP5.44□□□□□ -1.54
GEN1-204ENST00000528873 LNX2Q8N448 690 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 Q8NA96 180 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 KAT5Q92993 513 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 ZNF764Q96H86 408 aaPredicted RBP5.44□□□□□ -1.54
GEN1-204ENST00000528873 TEKT5Q96M29 485 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 PACSIN1Q9BY11 444 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 R3HDMLQ9H3Y0 253 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 PRDM13Q9H4Q3 707 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 KCTD5Q9NXV2 234 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.44□□□□□ -1.54
GEN1-204ENST00000528873 COX11Q9Y6N1 276 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 SPATA31A6Q5VVP1 1343 aa5.44□□□□□ -1.54
GEN1-204ENST00000528873 MASP2O00187 686 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 GABRDO14764 452 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 SLC43A1O75387 559 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 RPLP2P05387 115 aaKnown RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 CCND1P24385 295 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 EDNRBP24530 442 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 CD38P28907 300 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 ELLP55199 621 aaPredicted RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 EVA1CP58658 441 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 SIM1P81133 766 aaPredicted RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 MRPS21P82921 87 aaKnown RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 AMPD3Q01432 767 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 ZNF844Q08AG5 666 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 SF3B3Q15393 1217 aaKnown RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 CCDC142Q17RM4 750 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 PRPF38AQ8NAV1 312 aaKnown RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 MRGPRX4Q96LA9 322 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 TLR10Q9BXR5 811 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 ALG13Q9NP73 1137 aaKnown RBP5.43□□□□□ -1.54
GEN1-204ENST00000528873 JKAMPQ9P055 326 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 FOXJ2Q9P0K8 574 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 CALCOCO1Q9P1Z2 691 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 CDYLQ9Y232 598 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 PCDHB1Q9Y5F3 818 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 KAT6AQ92794 2004 aa5.43□□□□□ -1.54
GEN1-204ENST00000528873 ALG1L2C9J202 215 aa5.42□□□□□ -1.54
GEN1-204ENST00000528873 PEX1O43933 1283 aa5.42□□□□□ -1.54
GEN1-204ENST00000528873 FBLP22087 321 aaKnown RBP5.42□□□□□ -1.54
GEN1-204ENST00000528873 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
GEN1-204ENST00000528873 UAP1L1Q3KQV9 507 aa5.42□□□□□ -1.54
GEN1-204ENST00000528873 SYCE2Q6PIF2 218 aa5.42□□□□□ -1.54
GEN1-204ENST00000528873 CLNKQ7Z7G1 428 aa5.42□□□□□ -1.54
GEN1-204ENST00000528873 AOPEPQ8N6M6 819 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms