RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 TCRBV5S1A1TA0A578 114 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 TMEM120BA0PK00 339 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 FAM170AA1A519 330 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 SMIM23A6NLE4 172 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 O00370 1275 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ATP2A1O14983 1001 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 RGS20O76081 388 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 LDHAP00338 332 aaKnown RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 VIMP08670 466 aaKnown RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 RALAP11233 206 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 TBXAS1P24557 533 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 DSG3P32926 999 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ICAM3P32942 547 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 PTPN7P35236 360 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ARL2P36404 184 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ADCY8P40145 1251 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 NSFP46459 744 aaKnown RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 SLCO1A2P46721 670 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF132P52740 706 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 TAS2R40P59535 323 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF280AP59817 542 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 BNIP1Q12981 228 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 NR1H3Q13133 447 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 CUL2Q13617 745 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 MPP2Q14168 576 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF268Q14587 947 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 RASA2Q15283 850 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 LONRF1Q17RB8 773 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 TDRD10Q5VZ19 366 aaKnown RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 RNF43Q68DV7 783 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 SWSAP1Q6NVH7 229 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 TDRPQ86YL5 185 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 CYP4X1Q8N118 509 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ZCCHC9Q8N567 271 aaKnown RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 GBP7Q8N8V2 638 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC63Q8NA47 563 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 CPA5Q8WXQ8 436 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 MAML1Q92585 1016 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 GRAMD1AQ96CP6 724 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 C12orf42Q96LP6 360 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 MAGEB18Q96M61 343 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC77Q9BR77 488 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 FAM213AQ9BRX8 229 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 POLR3FQ9H1D9 316 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 TMEM134Q9H6X4 195 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 APOBEC3GQ9HC16 384 aaKnown RBP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 CD248Q9HCU0 757 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.98
CSTF3-208ENST00000528865 RNF146Q9NTX7 359 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ADAM22Q9P0K1 906 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF112Q9UJU3 913 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 NAALADL1Q9UQQ1 740 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 SCINQ9Y6U3 715 aa8.9□□□□□ -0.98
CSTF3-208ENST00000528865 ADGRA2Q96PE1 1338 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ZNF541Q9H0D2 1346 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CNTNAP2Q9UHC6 1331 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 TESPA1A2RU30 521 aaPredicted RBP8.89□□□□□ -0.99
CSTF3-208ENST00000528865 TMEM191CA6NGB0 347 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 DNALI1O14645 258 aaPredicted RBP8.89□□□□□ -0.99
CSTF3-208ENST00000528865 NDC80O14777 642 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 HNRNPDLO14979 420 aaKnown RBP8.89□□□□□ -0.99
CSTF3-208ENST00000528865 THAP12O43422 761 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CDH16O75309 829 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 SUN1O94901 812 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ACSL3O95573 720 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CALCAP01258 141 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CLTAP09496 248 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 TMEM191BP0C7N4 346 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 SUPT20HL2P0C7V6 817 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ALADP13716 330 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 BRAFP15056 766 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CREB1P16220 341 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ATP4AP20648 1035 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 KCNA3P22001 575 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 SLC8A1P32418 973 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CETN2P41208 172 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 LIG4P49917 911 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 AP3M2P53677 418 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 SOX10P56693 466 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 NLRP11P59045 1033 aaKnown RBP8.89□□□□□ -0.99
CSTF3-208ENST00000528865 COPS2P61201 443 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 NCALDP61601 193 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CXCL9Q07325 125 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 MCL1Q07820 350 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CCDC15Q0P6D6 951 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 GRM1Q13255 1194 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ACVR2BQ13705 512 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 SUPT20HL1Q3ZLR7 823 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CCDC38Q502W7 563 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 IZUMO3Q5VZ72 239 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 MIS18BP1Q6P0N0 1132 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 PPP1R21Q6ZMI0 780 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 RGS9BPQ6ZS82 235 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ARHGEF18Q6ZSZ5 1173 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 CCDC25Q86WR0 208 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 NIM1KQ8IY84 436 aa8.89□□□□□ -0.99
CSTF3-208ENST00000528865 ANKRD35Q8N283 1001 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms