RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 OR6Y1Q8NGX8 325 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 LZICQ8WZA0 190 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 TTC25Q96NG3 672 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 PHF12Q96QT6 1004 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 MANSC1Q9H8J5 431 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 ARHGEF38Q9NXL2 777 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 PPM1HQ9ULR3 514 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 FAF1Q9UNN5 650 aaPredicted RBP13.21□□□□□ -0.3
TSKU-203ENST00000527881 MAGEB3O15480 346 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MTM1Q13496 603 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MTMR2Q13614 643 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 RASA2Q15283 850 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CYP1B1Q16678 543 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 RAPH1Q70E73 1250 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 NCSTNQ92542 709 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CCDC124Q96CT7 223 aaKnown RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 TDRKHQ9Y2W6 561 aaKnown RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 A0A0J9YVX5 310 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 GOLGA8SH3BPF8 625 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 GOLGA8MH3BSY2 632 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MYL2P10916 166 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MUTP22033 750 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 RGS2P41220 211 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CBWD6Q4V339 395 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 TMEM259Q4ZIN3 620 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CBWD3Q5JTY5 395 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CBWD5Q5RIA9 395 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 ZBED8Q8IZ13 594 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 TAB3Q8N5C8 712 aaPredicted RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 TGFBRAP1Q8WUH2 860 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 CCDC28BQ9BUN5 200 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 RUSC1Q9BVN2 902 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 IQCGQ9H095 443 aaKnown RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 FAM13AO94988 1023 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 PABPC4LP0CB38 370 aaKnown RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 EEF2P13639 858 aaKnown RBP13.2□□□□□ -0.3
TSKU-203ENST00000527881 YY1P25490 414 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 RXRBP28702 533 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MAN1A1P33908 653 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 PSMC6P62333 389 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 LPCAT4Q643R3 524 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 ANKMY2Q8IV38 441 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 HAS1Q92839 578 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 RILPQ96NA2 401 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 EYA3Q99504 573 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 BCAS3Q9H6U6 928 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 ACP6Q9NPH0 428 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 LRRC4BQ9NT99 713 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 BTBD7Q9P203 1132 aa13.2□□□□□ -0.3
TSKU-203ENST00000527881 MED24O75448 989 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 TCEA3O75764 348 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 FGFR1P11362 822 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 FUT4P22083 530 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 EPHB1P54762 984 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 ACAD11Q709F0 780 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 BBOF1Q8ND07 529 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 PTCD3Q96EY7 689 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 SPECC1L-ADORA2AF8WAN1 911 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 CDK16Q00536 496 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 PTK6Q13882 451 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 TRIP10Q15642 601 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 C12orf60Q5U649 245 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 ZNF554Q86TJ5 538 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 DENND1AQ8TEH3 1009 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 BHMT2Q9H2M3 363 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 MTO1Q9Y2Z2 717 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 NEU2Q9Y3R4 380 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 BCL9O00512 1426 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 SMIM31A0A1B0GVY4 71 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 PRPF4O43172 522 aaKnown RBP eCLIP13.19□□□□□ -0.3
TSKU-203ENST00000527881 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
TSKU-203ENST00000527881 NOP14P78316 857 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 CETN1Q12798 172 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 TCP10LQ8TDR4 215 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 DGCR14Q96DF8 476 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 NMUR2Q9GZQ4 415 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 RANBP17Q9H2T7 1088 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 ANAPC7Q9UJX3 599 aa13.19□□□□□ -0.3
TSKU-203ENST00000527881 R3HDM2Q9Y2K5 976 aaKnown RBP13.19□□□□□ -0.3
TSKU-203ENST00000527881 ASTN1O14525 1302 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms