RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PLPPR4Q7Z2D5 763 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 H3BRJ5 948 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 HYIQ5T013 277 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 SPRYD7Q5W111 196 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 FAM117BQ6P1L5 589 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 EFCAB13Q8IY85 973 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 KLHL8Q9P2G9 620 aaPredicted RBP15.95■□□□□ 0.14
USP47-207ENST00000527733 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
USP47-207ENST00000527733 ATP1A2P50993 1020 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 FAF2Q96CS3 445 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 MCEEQ96PE7 176 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 APBA2Q99767 749 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 TMEM117Q9H0C3 514 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 TRIM17Q9Y577 477 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 C5P01031 1676 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 LYPLA2O95372 231 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 ZFXP17010 805 aaPredicted RBP15.94■□□□□ 0.14
USP47-207ENST00000527733 GABPB1Q06547 395 aaPredicted RBP15.94■□□□□ 0.14
USP47-207ENST00000527733 PYROXD1Q8WU10 500 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 SIK2Q9H0K1 926 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 LAMB4A4D0S4 1761 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 AP5Z1O43299 807 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 BEX3Q00994 111 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 SLC27A1Q6PCB7 646 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 NKX2-3Q8TAU0 364 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 ASB7Q9H672 318 aa15.94■□□□□ 0.14
USP47-207ENST00000527733 FAM187AA6NFU0 413 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 MOCS2O96007 188 aaPredicted RBP15.93■□□□□ 0.14
USP47-207ENST00000527733 MSH2P43246 934 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 MYL6P60660 151 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 PLCB4Q15147 1175 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 KCTD16Q68DU8 428 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 ACAD10Q6JQN1 1059 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 C4orf50Q6ZRC1 276 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 PARD3BQ8TEW8 1205 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 MTMR8Q96EF0 704 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 NRCAMQ92823 1304 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 LRRC10BA6NIK2 292 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 F8VZ95 297 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 RNF40O75150 1001 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 KCNA1Q09470 495 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 CCDC137Q6PK04 289 aaKnown RBP15.93■□□□□ 0.14
USP47-207ENST00000527733 PKNOX2Q96KN3 472 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 RABEP2Q9H5N1 569 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 TMEM134Q9H6X4 195 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 MAGED2Q9UNF1 606 aaPredicted RBP15.93■□□□□ 0.14
USP47-207ENST00000527733 ALG6Q9Y672 507 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 TMEM88BA6NKF7 163 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 SGPL1O95470 568 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 THP07101 528 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 ATICP31939 592 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 CAV1Q03135 178 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 CASP8Q14790 479 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 ALS2CLQ60I27 953 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 BRSK2Q8IWQ3 736 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 RCOR2Q8IZ40 523 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 UBA3Q8TBC4 463 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 CABS1Q96KC9 395 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 LBHD1Q9BQE6 289 aaPredicted RBP15.93■□□□□ 0.14
USP47-207ENST00000527733 KIF9Q9HAQ2 790 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 INTS13Q9NVM9 706 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 CYP11B1P15538 503 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 BMP6P22004 513 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 CASP5P51878 434 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 EIF3BP55884 814 aaKnown RBP15.93■□□□□ 0.14
USP47-207ENST00000527733 GTF2BQ00403 316 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 MAPRE1Q15691 268 aaKnown RBP15.93■□□□□ 0.14
USP47-207ENST00000527733 GOLGA7BQ2TAP0 167 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 PCGF5Q86SE9 256 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 SEPT8Q92599 483 aa15.93■□□□□ 0.14
USP47-207ENST00000527733 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 A0A0G2JLL6 359 aaPredicted RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 ODC1P11926 461 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 SAT1P21673 171 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 AXLP30530 894 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 ARL4CP56559 192 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 FBXO38Q6PIJ6 1188 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 PRRT2Q7Z6L0 340 aaPredicted RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 GLIS3Q8NEA6 775 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 CYP3A43Q9HB55 503 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 BTBD7Q9P203 1132 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 MAFO75444 373 aaPredicted RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 FAM200BP0CF97 657 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 VDRP11473 427 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 GZMAP12544 262 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 GLRA2P23416 452 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 HEATR6Q6AI08 1181 aaKnown RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 C1orf131Q8NDD1 294 aaKnown RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 USP20Q9Y2K6 914 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 CASZ1Q86V15 1759 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 LOC102724159A0A0B4J2E5 919 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 HOXA2O43364 376 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 MSCO60682 206 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 KRT10P13645 584 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 CLK2P49760 499 aaKnown RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 ATN1P54259 1190 aaPredicted RBP15.92■□□□□ 0.14
USP47-207ENST00000527733 PSMD6Q15008 389 aa15.92■□□□□ 0.14
USP47-207ENST00000527733 PWP2Q15269 919 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms