RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CALCAP01258 141 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 HPDP32754 393 aaPredicted RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 ZNF132P52740 706 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 CORO7P57737 925 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 PLEKHA7Q6IQ23 1121 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 UBR7Q8N806 425 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 PRPF31Q8WWY3 499 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 TLCD1Q96CP7 247 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 DDX27Q96GQ7 796 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 PAGR1Q9BTK6 254 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 C2orf40Q9H1Z8 148 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 ADAM22Q9P0K1 906 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 WHRNQ9P202 907 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 ATXN2Q99700 1313 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 CXCL11O14625 94 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 ASS1P00966 412 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 RARGP13631 454 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 CDR1P51861 262 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 BYSLQ13895 437 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 ODF2Q5BJF6 829 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 PLPPR4Q7Z2D5 763 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 ZBTB8OSQ8IWT0 167 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 NLGN2Q8NFZ4 835 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 PGM2Q96G03 612 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 JPH2Q9BR39 696 aaPredicted RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 TMEM109Q9BVC6 243 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 CNOT10Q9H9A5 744 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 BCCIPQ9P287 314 aaKnown RBP eCLIP16.35■□□□□ 0.21
USH1C-207ENST00000527720 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
USH1C-207ENST00000527720 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
USH1C-207ENST00000527720 MCM3APO60318 1980 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 IGKV6-21A0A0C4DH24 114 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 OGTO15294 1046 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 CALCOCO2Q13137 446 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 R3HDM1Q15032 1099 aaKnown RBP16.34■□□□□ 0.21
USH1C-207ENST00000527720 PPP1R7Q15435 360 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 SULF1Q8IWU6 871 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 RHOT1Q8IXI2 618 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 ACO2Q99798 780 aaKnown RBP16.34■□□□□ 0.21
USH1C-207ENST00000527720 MGAMO43451 1857 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 THAP12O43422 761 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 PAEPP09466 180 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 MCL1Q07820 350 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 MAMLD1Q13495 774 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 GPR20Q99678 358 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 C11orf70Q9BRQ4 267 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 PARVAQ9NVD7 372 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
USH1C-207ENST00000527720 LOC102724159A0A0B4J2E5 919 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 PEX10O60683 326 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 CNMDO75829 334 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 LSM8O95777 96 aaKnown RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 ITIH2P19823 946 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 SLC26A2P50443 739 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 ADCY2Q08462 1091 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 LAMTOR4Q0VGL1 99 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 DRP2Q13474 957 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 PTK6Q13882 451 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 PWP2Q15269 919 aaKnown RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 MAPK6Q16659 721 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 KCTD19Q17RG1 926 aaPredicted RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 TRIM7Q9C029 511 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 ASCC2Q9H1I8 757 aaPredicted RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 FAM107AO95990 144 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 PRKCBP05771 671 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 KCNJ1P48048 391 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 MAGOHP61326 146 aaKnown RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 CAV1Q03135 178 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 KRT17Q04695 432 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 PDE4CQ08493 712 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 SGSM1Q2NKQ1 1148 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 TRMT10CQ7L0Y3 403 aaKnown RBP16.33■□□□□ 0.2
USH1C-207ENST00000527720 NLRP14Q86W24 1093 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 ZNF606Q8WXB4 792 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 TCHPQ9BT92 498 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 DCLK3Q9C098 648 aa16.33■□□□□ 0.2
USH1C-207ENST00000527720 NOP56O00567 594 aaKnown RBP16.32■□□□□ 0.2
USH1C-207ENST00000527720 GAS8O95995 478 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
USH1C-207ENST00000527720 SLC29A2Q14542 456 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 DUOXA2Q1HG44 320 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 EXD1Q8NHP7 514 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 FEZF2Q8TBJ5 459 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 C1orf54Q8WWF1 131 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 ZNF518BQ9C0D4 1074 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 IP6K2Q9UHH9 426 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 GGA2Q9UJY4 613 aa16.32■□□□□ 0.2
USH1C-207ENST00000527720 CPSF3Q9UKF6 684 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms