RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SPDL1Q96EA4 605 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 VPS33BQ9H267 617 aa13.3□□□□□ -0.28
CAPN1-208ENST00000527323 RASA4BC9J798 803 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 IPO5O00410 1097 aaKnown RBP13.29□□□□□ -0.28
CAPN1-208ENST00000527323 RASA4O43374 803 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 SP4Q02446 784 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 MYBPC2Q14324 1141 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 TREML2Q5T2D2 321 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 WDR78Q5VTH9 848 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 GSTA5Q7RTV2 222 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 MIER3Q7Z3K6 550 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 MAB21L3Q8N8X9 362 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 MAGEB18Q96M61 343 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 SBF1O95248 1867 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 IRF6O14896 467 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 SPAG7O75391 227 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ALADP13716 330 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ZFYVE27Q5T4F4 411 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 PPP1R21Q6ZMI0 780 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 GADL1Q6ZQY3 521 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ATL2Q8NHH9 583 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 MAIP1Q8WWC4 291 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
CAPN1-208ENST00000527323 KLRG1Q96E93 195 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ZNF570Q96NI8 536 aa13.29□□□□□ -0.28
CAPN1-208ENST00000527323 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
CAPN1-208ENST00000527323 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
CAPN1-208ENST00000527323 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
CAPN1-208ENST00000527323 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 CDH16O75309 829 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 CDR2Q01850 454 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 ACAD10Q6JQN1 1059 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 HAUS6Q7Z4H7 955 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 ECHDC2Q86YB7 292 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 DHX38Q92620 1227 aaKnown RBP13.28□□□□□ -0.28
CAPN1-208ENST00000527323 SEMA4DQ92854 862 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 MRRFQ96E11 262 aaKnown RBP13.28□□□□□ -0.28
CAPN1-208ENST00000527323 FAXDC2Q96IV6 333 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
CAPN1-208ENST00000527323 ADAM22Q9P0K1 906 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 CCPG1Q9ULG6 757 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 TP73O15350 636 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 SLC16A4O15374 487 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 CETPP11597 493 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 GCKP35557 465 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 CAV1Q03135 178 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 C2CD6Q53TS8 623 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 CBWD2Q8IUF1 395 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 FAM167BQ9BTA0 163 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 FOXN2P32314 431 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 MAN1A1P33908 653 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 PEX3P56589 373 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 PTK6Q13882 451 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 MTFR1Q15390 333 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 TAF11Q15544 211 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 SLC17A8Q8NDX2 589 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 NT5C1BQ96P26 610 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 DCLK3Q9C098 648 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 PRKAG3Q9UGI9 489 aa13.28□□□□□ -0.28
CAPN1-208ENST00000527323 R3HDM2Q9Y2K5 976 aaKnown RBP13.28□□□□□ -0.28
CAPN1-208ENST00000527323 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 TAC1P20366 129 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 IVDP26440 423 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 MGAT5Q09328 741 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 TRAF1Q13077 416 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 DNAJC3Q13217 504 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 ZNF568Q3ZCX4 644 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 ANKRD20A2Q5SQ80 823 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.28
CAPN1-208ENST00000527323 ANKRD20A1Q5TYW2 823 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 ANKRD20A3Q5VUR7 823 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 DAB2IPQ5VWQ8 1189 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 IZUMO3Q5VZ72 239 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 CAPN12Q6ZSI9 719 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 SYDE1Q6ZW31 735 aaPredicted RBP13.27□□□□□ -0.28
CAPN1-208ENST00000527323 PRUNE1Q86TP1 453 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 SHC3Q92529 594 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 GRAMD1AQ96CP6 724 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 ERP27Q96DN0 273 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 STRA6Q9BX79 667 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 GPBP1L1Q9HC44 474 aaPredicted RBP13.27□□□□□ -0.28
CAPN1-208ENST00000527323 TXLNGQ9NUQ3 528 aa13.27□□□□□ -0.28
CAPN1-208ENST00000527323 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.28
CAPN1-208ENST00000527323 MUTP22033 750 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 RNF43Q68DV7 783 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 KRT39Q6A163 491 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 ASRGL1Q7L266 308 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 CPA5Q8WXQ8 436 aa13.27□□□□□ -0.29
CAPN1-208ENST00000527323 SLCO2A1Q92959 643 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms