RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 CFAP221Q4G0U5 840 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 TMEM270Q6UE05 265 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 EFCAB13Q8IY85 973 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 TMEM192Q8IY95 271 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 ARHGEF26Q96DR7 871 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 RHOXF2Q9BQY4 288 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 PACSIN2Q9UNF0 486 aaPredicted RBP17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 LACTBL1A8MY62 500 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 PDE2AO00408 941 aaPredicted RBP17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 KIF3CO14782 793 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 DUSP11O75319 330 aaKnown RBP17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 DNA2P51530 1060 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 LACTBP83111 547 aaPredicted RBP17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 TMEM62Q0P6H9 643 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 CASP8Q14790 479 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 PCBP1Q15365 356 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 NOA1Q8NC60 698 aaKnown RBP17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 ASB7Q9H672 318 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 CTTNBP2NLQ9P2B4 639 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 CNTN6Q9UQ52 1028 aa17.35■□□□□ 0.37
SNRNP35-204ENST00000527158 FAM170AA1A519 330 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 KPNA6O60684 536 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 GPR32O75388 356 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 KIF4AO95239 1232 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 GNAT1P11488 350 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 ITIH3Q06033 890 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 TCEAL1Q15170 157 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 ZNF699Q32M78 642 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 ACAD10Q6JQN1 1059 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 ZNF572Q7Z3I7 529 aaPredicted RBP17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 KAT6AQ92794 2004 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 NIF3L1Q9GZT8 377 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 AMFRQ9UKV5 643 aa17.34■□□□□ 0.37
SNRNP35-204ENST00000527158 UMODL1Q5DID0 1318 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 CES2O00748 559 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 BUB1BO60566 1050 aaPredicted RBP17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 HADHBP55084 474 aaKnown RBP17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 NOGQ13253 232 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 CLEC16AQ2KHT3 1053 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 CATSPER4Q7RTX7 472 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 C7orf31Q8N865 590 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 RBBP8NLQ8NC74 664 aaPredicted RBP17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 PPP1R13LQ8WUF5 828 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 ACAP3Q96P50 834 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 ARHGAP39Q9C0H5 1083 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 GOLPH3Q9H4A6 298 aa17.33■□□□□ 0.37
SNRNP35-204ENST00000527158 C17orf102A2RUQ5 167 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 H3BQF6 201 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 KRT19P08727 400 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 C6orf222P0C671 652 aaPredicted RBP17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 GNA15P30679 374 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 HNRNPH2P55795 449 aaKnown RBP17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 ADAM17P78536 824 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 PURAQ00577 322 aaKnown RBP17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 DCAF4L1Q3SXM0 396 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 SMYD5Q6GMV2 418 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 RUFY4Q6ZNE9 571 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 DNAJB3Q8WWF6 145 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 PBKQ96KB5 322 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 SELENOOQ9BVL4 669 aa17.33■□□□□ 0.36
SNRNP35-204ENST00000527158 KCNK3O14649 394 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 IVLP07476 585 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 NFICP08651 508 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 FGFR4P22455 802 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 FLT3LGP49771 235 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 SCARA3Q6AZY7 606 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 JADE1Q6IE81 842 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 TRIM72Q6ZMU5 477 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 NT5DC3Q86UY8 548 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 TRPV1Q8NER1 839 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 SPATA4Q8NEY3 305 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 OSMRQ99650 979 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 SPC25Q9HBM1 224 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 GABRQQ9UN88 632 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 COG5Q9UP83 839 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 TREHO43280 583 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 CALCAP01258 141 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 CYBAP13498 195 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 DARSP14868 501 aaKnown RBP17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 AARSP49588 968 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 YWHAEP62258 255 aaKnown RBP17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 SLC10A6Q3KNW5 377 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 LEKR1Q6ZMV7 388 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 CD302Q8IX05 232 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 TRIB2Q92519 343 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 ZNF653Q96CK0 615 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 GTF3C4Q9UKN8 822 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 STXBP5LQ9Y2K9 1186 aa17.32■□□□□ 0.36
SNRNP35-204ENST00000527158 MROH7Q68CQ1 1323 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 RPS6KA5O75582 802 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 CYP1A2P05177 515 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 UNGP13051 313 aaPredicted RBP17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 EIF4BP23588 611 aaKnown RBP17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 GRM5P41594 1212 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 C2orf54Q08AI8 447 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 HIC1Q14526 733 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 GNASQ5JWF2 1037 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 NOTUMQ6P988 496 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 SLC27A1Q6PCB7 646 aa17.31■□□□□ 0.36
SNRNP35-204ENST00000527158 NME8Q8N427 588 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms