RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ALKAL1Q6UXT8 129 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 CACNA2D4Q7Z3S7 1137 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 NOSTRINQ8IVI9 506 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 HS6ST3Q8IZP7 471 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 BEST2Q8NFU1 509 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 SHKBP1Q8TBC3 707 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 AIFM3Q96NN9 605 aa17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 NAP1L4Q99733 375 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 SMG1Q96Q15 3661 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-203ENST00000527154 PRRG1O14668 218 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 SOX9P48436 509 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 SOX4Q06945 474 aaPredicted RBP17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 SSRP1Q08945 709 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 EEF1DP3Q658K8 133 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 PSAPL1Q6NUJ1 521 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 KBTBD6Q86V97 674 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 TMC8Q8IU68 726 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 JAKMIP1Q96N16 626 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 LRRC3BQ96PB8 259 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 MKNK1Q9BUB5 465 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 CYP4F11Q9HBI6 524 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 GPRC5CQ9NQ84 441 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 VPS45Q9NRW7 570 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 AFF4Q9UHB7 1163 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 FBXL5Q9UKA1 691 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 SNX14Q9Y5W7 946 aa17.89■□□□□ 0.45
CHMP4A-203ENST00000527154 PDCD11Q14690 1871 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 LRRIQ4A6NIV6 560 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 SLC38A8A6NNN8 435 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 I3L4J1 428 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 CCNT1O60563 726 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 HSPA4P34932 840 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 PRPF4BQ13523 1007 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 CCDC6Q16204 474 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 DCAF4L1Q3SXM0 396 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 GLRA4Q5JXX5 417 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 IQCEQ6IPM2 695 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 CSGALNACT1Q8TDX6 532 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 C2orf40Q9H1Z8 148 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 GOLGA2P5Q9HBQ8 144 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 OBP2AQ9NY56 170 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 LAMA5O15230 3695 aa17.88■□□□□ 0.45
CHMP4A-203ENST00000527154 DSPP15924 2871 aaKnown RBP17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 SMIM28A0A1B0GU29 152 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 SOBPA7XYQ1 873 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 RPP40O75818 363 aaKnown RBP17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 PRKCBP05771 671 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 WEE1P30291 646 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 MPLP40238 635 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 TEAD2Q15562 447 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 MAPK6Q16659 721 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 PKN3Q6P5Z2 889 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 ZBTB8OSQ8IWT0 167 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 MCPH1Q8NEM0 835 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 BSNDQ8WZ55 320 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 ZNF512Q96ME7 567 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 ADPGKQ9BRR6 497 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 ADAM33Q9BZ11 813 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 ASAH2Q9NR71 780 aa17.87■□□□□ 0.45
CHMP4A-203ENST00000527154 AKAP13Q12802 2813 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 CCDC194A0A1B0GVG4 234 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 H7C4K7 107 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 EXTL3O43909 919 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 GJA1P17302 382 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 TWF1Q12792 350 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 EARS2Q5JPH6 523 aaKnown RBP17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 PIGOQ8TEQ8 1089 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 KCNJ14Q9UNX9 436 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 GDAQ9Y2T3 454 aa17.86■□□□□ 0.45
CHMP4A-203ENST00000527154 FREM2Q5SZK8 3169 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 GIPC1O14908 333 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 USO1O60763 962 aaKnown RBP17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 VNN2O95498 520 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 SPATA31C1P0DKV0 1188 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 NAMPTP43490 491 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 KPNA1P52294 538 aaPredicted RBP17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 PLK5Q496M5 336 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 ARHGAP29Q52LW3 1261 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 RNF43Q68DV7 783 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 ELMOD1Q8N336 334 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 OXER1Q8TDS5 423 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 SUSD3Q96L08 255 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 DUSP15Q9H1R2 295 aaPredicted RBP17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 SMOC1Q9H4F8 434 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 USP20Q9Y2K6 914 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 LOC400499M0QZD8 3231 aa17.85■□□□□ 0.45
CHMP4A-203ENST00000527154 EML5Q05BV3 1969 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 KIF26AQ9ULI4 1882 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 NBEAQ8NFP9 2946 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 CSRP1P21291 193 aaKnown RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 NOVA1P51513 510 aaKnown RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 PON2Q15165 354 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms