RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 NUB1Q9Y5A7 615 aa20.51■□□□□ 0.87
CAPN1-206ENST00000526966 SPTBN2O15020 2390 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 MED19A0JLT2 244 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-206ENST00000526966 PP2D1A8MPX8 630 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 ZNF197O14709 1029 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 CCR2P41597 374 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 FAM78AQ5JUQ0 283 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 RINT1Q6NUQ1 792 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 C18orf25Q96B23 403 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-206ENST00000526966 ASB16Q96NS5 453 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 NTPCRQ9BSD7 190 aaKnown RBP20.5■□□□□ 0.87
CAPN1-206ENST00000526966 ZSCAN32Q9NX65 697 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 MRPS17Q9Y2R5 130 aaKnown RBP20.5■□□□□ 0.87
CAPN1-206ENST00000526966 PCDHB6Q9Y5E3 794 aa20.5■□□□□ 0.87
CAPN1-206ENST00000526966 LAD1O00515 517 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 NRG2O14511 850 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-206ENST00000526966 SEC24BO95487 1268 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 ARPP19P56211 112 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 CTXN3Q4LDR2 81 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 KRT79Q5XKE5 535 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 ZNF280DQ6N043 979 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 PDZD4Q76G19 769 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-206ENST00000526966 KCNK18Q7Z418 384 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 TCHPQ9BT92 498 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 MMTAG2Q9BU76 263 aaKnown RBP20.49■□□□□ 0.87
CAPN1-206ENST00000526966 TIPINQ9BVW5 301 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 EPC1Q9H2F5 836 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 ZFP14Q9HCL3 533 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 AFF4Q9UHB7 1163 aaKnown RBP20.49■□□□□ 0.87
CAPN1-206ENST00000526966 MAFFQ9ULX9 164 aa20.49■□□□□ 0.87
CAPN1-206ENST00000526966 SLC16A4O15374 487 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 MOSPD3O75425 235 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 TOM1L1O75674 476 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 GUCY2CP25092 1073 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 PRPHP41219 470 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 EPHA5P54756 1037 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 GRM2Q14416 872 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 IL17AQ16552 155 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 SLC10A6Q3KNW5 377 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 FAM184AQ8NB25 1140 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 SPIRE2Q8WWL2 714 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 ATRIPQ8WXE1 791 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 DDX12PQ92771 950 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 ZBTB45Q96K62 511 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-206ENST00000526966 BRD9Q9H8M2 597 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 TRPV5Q9NQA5 729 aa20.48■□□□□ 0.87
CAPN1-206ENST00000526966 MAN2B1O00754 1011 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 CDC25AP30304 524 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 MCM4P33991 863 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 NOLC1Q14978 699 aaKnown RBP eCLIP20.47■□□□□ 0.87
CAPN1-206ENST00000526966 CYP4A22Q5TCH4 519 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 MAP4K3Q8IVH8 894 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 LEMD2Q8NC56 503 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 APPL2Q8NEU8 664 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 ZSCAN31Q96LW9 406 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-206ENST00000526966 TBC1D32Q96NH3 1257 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 TRMT61BQ9BVS5 477 aaKnown RBP20.47■□□□□ 0.87
CAPN1-206ENST00000526966 FAM126AQ9BYI3 521 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-206ENST00000526966 CHRDQ9H2X0 955 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-206ENST00000526966 CEP72Q9P209 647 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 NCDNQ9UBB6 729 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 TUBGCP4Q9UGJ1 667 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 PCDHB8Q9UN66 801 aa20.47■□□□□ 0.87
CAPN1-206ENST00000526966 SMG5Q9UPR3 1016 aaKnown RBP20.47■□□□□ 0.87
CAPN1-206ENST00000526966 TPRP12270 2363 aaKnown RBP20.46■□□□□ 0.87
CAPN1-206ENST00000526966 HARSP12081 509 aaKnown RBP20.46■□□□□ 0.87
CAPN1-206ENST00000526966 TDGF1P13385 188 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 TWF1Q12792 350 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 MTAPQ13126 283 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 HYIQ5T013 277 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 IQCEQ6IPM2 695 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 TSSK4Q6SA08 328 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 VITQ6UXI7 678 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 ZPBP2Q6X784 338 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 MAMSTRQ6ZN01 415 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 HS6ST3Q8IZP7 471 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 ELMOD1Q8N336 334 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 TMEM161BQ8NDZ6 487 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 BEST2Q8NFU1 509 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 DEPDC1BQ8WUY9 529 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 SMARCD2Q92925 531 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 IRF7Q92985 503 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 ZSWIM3Q96MP5 696 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 IER2Q9BTL4 223 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 TRPV4Q9HBA0 871 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 ZNF334Q9HCZ1 680 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-206ENST00000526966 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.46■□□□□ 0.87
CAPN1-206ENST00000526966 ANKFY1Q9P2R3 1169 aa20.46■□□□□ 0.87
CAPN1-206ENST00000526966 ANK1P16157 1881 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 NUP210Q8TEM1 1887 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-206ENST00000526966 SFI1A8K8P3 1242 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 M0QZQ0 153 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 MAPTP10636 758 aaKnown RBP20.45■□□□□ 0.86
CAPN1-206ENST00000526966 PLS3P13797 630 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 PSMC3P17980 439 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 MCL1Q07820 350 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 STRN3Q13033 797 aa20.45■□□□□ 0.86
CAPN1-206ENST00000526966 SEZ6Q53EL9 994 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms