RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NDST4Q9H3R1 872 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 CACNG4Q9UBN1 327 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 PHACTR2O75167 634 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 ARHGEF15O94989 841 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 VNN1O95497 513 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 CST3P01034 146 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-205ENST00000526954 TPM2P07951 284 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 POLR2BP30876 1174 aaKnown RBP17.81■□□□□ 0.44
CAPN1-205ENST00000526954 PNPLA4P41247 253 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 OR1G1P47890 313 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 COPB1P53618 953 aaKnown RBP17.81■□□□□ 0.44
CAPN1-205ENST00000526954 TAP1Q03518 808 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 SCARA3Q6AZY7 606 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 CD300LGQ6UXG3 332 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 LRRC52Q8N7C0 313 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 SAMD11Q96NU1 681 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 MMRN2Q9H8L6 949 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 TAB2Q9NYJ8 693 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 AGAP1Q9UPQ3 857 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 PCDHB12Q9Y5F1 795 aa17.81■□□□□ 0.44
CAPN1-205ENST00000526954 GTPBP10A4D1E9 387 aaKnown RBP17.8■□□□□ 0.44
CAPN1-205ENST00000526954 STAU1O95793 577 aaKnown RBP17.8■□□□□ 0.44
CAPN1-205ENST00000526954 HLA-DRAP01903 254 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 KRT19P08727 400 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 ATICP31939 592 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 PPM1AP35813 382 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 BMPR1AP36894 532 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 ERVK-21P61565 698 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 MYL7Q01449 175 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 CETN1Q12798 172 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 TRPC3Q13507 836 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 NCOA4Q13772 614 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 EPC2Q52LR7 807 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 C3orf58Q8NDZ4 430 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 FBXL13Q8NEE6 735 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 TAS1R2Q8TE23 839 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 IGSF21Q96ID5 467 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 ZNF560Q96MR9 790 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 PLVAPQ9BX97 442 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 VPS16Q9H269 839 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 VRTNQ9H8Y1 702 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 MARCH5Q9NX47 278 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 SPG21Q9NZD8 308 aa17.8■□□□□ 0.44
CAPN1-205ENST00000526954 R3HCC1Q9Y3T6 440 aaKnown RBP17.8■□□□□ 0.44
CAPN1-205ENST00000526954 LGALS16A8MUM7 142 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 C5orf67F2Z3F1 127 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 PPEF2O14830 753 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 B3GAT3O94766 335 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 KIF4AO95239 1232 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 EFEMP2O95967 443 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 RB1P06400 928 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 DNAJB2P25686 324 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 PBX3P40426 434 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 PIK3CAP42336 1068 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 AARSP49588 968 aaKnown RBP eCLIP17.79■□□□□ 0.44
CAPN1-205ENST00000526954 LILRA4P59901 499 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 MYO1EQ12965 1108 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 SGSM1Q2NKQ1 1148 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 RABGGTAQ92696 567 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 TAF4BQ92750 862 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 SEMA4DQ92854 862 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 TGS1Q96RS0 853 aaKnown RBP17.79■□□□□ 0.44
CAPN1-205ENST00000526954 NKX2-4Q9H2Z4 354 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 RAB20Q9NX57 234 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
CAPN1-205ENST00000526954 PRG3Q9Y2Y8 225 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-205ENST00000526954 NT5C1B-RDH14C9J2C7 533 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 F8W810 466 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 ASS1P00966 412 aaKnown RBP17.78■□□□□ 0.44
CAPN1-205ENST00000526954 ITGB1P05556 798 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 IGFBP6P24592 240 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-205ENST00000526954 TAF6P49848 677 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 MYL6P60660 151 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 FANCCQ00597 558 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 PLCB3Q01970 1234 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 SV2CQ496J9 727 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-205ENST00000526954 LMO3Q8TAP4 145 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 BCL7CQ8WUZ0 217 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-205ENST00000526954 TIFAQ96CG3 184 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 HPDLQ96IR7 371 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 C17orf80Q9BSJ5 609 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 SLC28A3Q9HAS3 691 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 RTN4Q9NQC3 1192 aaKnown RBP17.78■□□□□ 0.44
CAPN1-205ENST00000526954 PLXNA4Q9HCM2 1894 aa17.78■□□□□ 0.44
CAPN1-205ENST00000526954 A0A1B0GTH6 734 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 SPTLC1O15269 473 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 TADA2AO75478 443 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 SERPINC1P01008 464 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 CTNNB1P35222 781 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 ELAVL2Q12926 359 aaKnown RBP17.77■□□□□ 0.44
CAPN1-205ENST00000526954 UVSSAQ2YD98 709 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 FILIP1LQ4L180 1135 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 GBP6Q6ZN66 633 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-205ENST00000526954 EHBP1Q8NDI1 1231 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 FAXDC2Q96IV6 333 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 SUSD3Q96L08 255 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms