RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 CEP120Q8N960 986 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 HDAC7Q8WUI4 952 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 SMG7Q92540 1137 aaKnown RBP13.29□□□□□ -0.28
CHKA-203ENST00000525155 ATOH1Q92858 354 aaPredicted RBP13.29□□□□□ -0.28
CHKA-203ENST00000525155 ACSF2Q96CM8 615 aaPredicted RBP13.29□□□□□ -0.28
CHKA-203ENST00000525155 FIZ1Q96SL8 496 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 ACO2Q99798 780 aaKnown RBP13.29□□□□□ -0.28
CHKA-203ENST00000525155 PRKD2Q9BZL6 878 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 PTPRHQ9HD43 1115 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 LMBRD1Q9NUN5 540 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 EPS15L1Q9UBC2 864 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 DUSP12Q9UNI6 340 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 SSX2IPQ9Y2D8 614 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 UBE4BO95155 1302 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 KMT2EQ8IZD2 1858 aa13.29□□□□□ -0.28
CHKA-203ENST00000525155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
CHKA-203ENST00000525155 ABLIM1O14639 778 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 HNRNPDLO14979 420 aaKnown RBP13.28□□□□□ -0.28
CHKA-203ENST00000525155 ZMYND10O75800 440 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 PIGRP01833 764 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 LAMP2P13473 410 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 NMT1P30419 496 aaKnown RBP13.28□□□□□ -0.28
CHKA-203ENST00000525155 LIG4P49917 911 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 SNRPFP62306 86 aaKnown RBP13.28□□□□□ -0.28
CHKA-203ENST00000525155 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
CHKA-203ENST00000525155 EHHADHQ08426 723 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 ALKAL1Q6UXT8 129 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 C3orf58Q8NDZ4 430 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 SMARCE1Q969G3 411 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
CHKA-203ENST00000525155 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 STRA6Q9BX79 667 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 PLEKHA4Q9H4M7 779 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 GDAQ9Y2T3 454 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 CLUHO75153 1309 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 ZMYM2Q9UBW7 1377 aa13.28□□□□□ -0.28
CHKA-203ENST00000525155 PROB1E7EW31 1015 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 ANHXE9PGG2 379 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 CLDN3O15551 220 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 KLRC4O43908 158 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 PPP1R37O75864 691 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 RHOBTB3O94955 611 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 THP07101 528 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 MCF2P10911 925 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 NUBP1P53384 320 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 XKR4Q5GH76 650 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 GLRA4Q5JXX5 417 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 ZMAT2Q96NC0 199 aaKnown RBP13.27□□□□□ -0.29
CHKA-203ENST00000525155 TTPALQ9BTX7 342 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 TARS2Q9BW92 718 aaKnown RBP13.27□□□□□ -0.29
CHKA-203ENST00000525155 GOLGA2P5Q9HBQ8 144 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHKA-203ENST00000525155 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 IGSF9Q9P2J2 1179 aa13.27□□□□□ -0.29
CHKA-203ENST00000525155 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
CHKA-203ENST00000525155 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 I3L4J1 428 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 NRG2O14511 850 aaPredicted RBP13.26□□□□□ -0.29
CHKA-203ENST00000525155 KIAA0391O15091 583 aaKnown RBP13.26□□□□□ -0.29
CHKA-203ENST00000525155 CFHP08603 1231 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 AOC1P19801 751 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 FGFR3P22607 806 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 PROZP22891 400 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 CASP1P29466 404 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 GBP2P32456 591 aaPredicted RBP13.26□□□□□ -0.29
CHKA-203ENST00000525155 MCM4P33991 863 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 PPP1R2P41236 205 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 MATR3P43243 847 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHKA-203ENST00000525155 CLCNKBP51801 687 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 MCL1Q07820 350 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 NOLC1Q14978 699 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHKA-203ENST00000525155 ZNF568Q3ZCX4 644 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 ZC2HC1CQ53FD0 456 aaPredicted RBP13.26□□□□□ -0.29
CHKA-203ENST00000525155 GRASPQ7Z6J2 395 aaPredicted RBP13.26□□□□□ -0.29
CHKA-203ENST00000525155 CEP57Q86XR8 500 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 SIX5Q8N196 739 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 FLCNQ8NFG4 579 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 SPATA20Q8TB22 786 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 ZNF507Q8TCN5 953 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 ZBTB45Q96K62 511 aaPredicted RBP13.26□□□□□ -0.29
CHKA-203ENST00000525155 ZDHHC7Q9NXF8 308 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 FBXW11Q9UKB1 542 aa13.26□□□□□ -0.29
CHKA-203ENST00000525155 SF3B1O75533 1304 aaKnown RBP eCLIP13.25□□□□□ -0.298e-6■■■■■ 107
CHKA-203ENST00000525155 SMIM28A0A1B0GU29 152 aa13.25□□□□□ -0.29
CHKA-203ENST00000525155 GFRA3O60609 400 aa13.25□□□□□ -0.29
CHKA-203ENST00000525155 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
CHKA-203ENST00000525155 NBL1P41271 181 aa13.25□□□□□ -0.29
CHKA-203ENST00000525155 BRCC3P46736 316 aa13.25□□□□□ -0.29
CHKA-203ENST00000525155 YARSP54577 528 aaKnown RBP13.25□□□□□ -0.29
CHKA-203ENST00000525155 POU5F1Q01860 360 aaKnown RBP13.25□□□□□ -0.29
CHKA-203ENST00000525155 PNOCQ13519 176 aa13.25□□□□□ -0.29
CHKA-203ENST00000525155 HTR4Q13639 388 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms