RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.39
CSTF3-205ENST00000524775 USP8P40818 1118 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 ASPAP45381 313 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 CDR2Q01850 454 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 NCBP1Q09161 790 aaKnown RBP12.61□□□□□ -0.39
CSTF3-205ENST00000524775 DSC3Q14574 896 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 TMEM132DQ14C87 1099 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 FAM47CQ5HY64 1035 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 APBB1IPQ7Z5R6 666 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-205ENST00000524775 RSPH3Q86UC2 560 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 NIF3L1Q9GZT8 377 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.39
CSTF3-205ENST00000524775 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 TRMT13Q9NUP7 481 aaKnown RBP12.61□□□□□ -0.39
CSTF3-205ENST00000524775 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 POLIQ9UNA4 740 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 ST3GAL5Q9UNP4 418 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 PIN4Q9Y237 131 aaKnown RBP12.61□□□□□ -0.39
CSTF3-205ENST00000524775 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 TRIM17Q9Y577 477 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 NCANO14594 1321 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 SCN5AQ14524 2016 aa12.61□□□□□ -0.39
CSTF3-205ENST00000524775 A0A0A6YYK5 440 aaPredicted RBP12.6□□□□□ -0.39
CSTF3-205ENST00000524775 A0A1W2PQ45 241 aaPredicted RBP12.6□□□□□ -0.39
CSTF3-205ENST00000524775 A0A1W2PQY0 241 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 MACROD2A1Z1Q3 448 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 RECQL4O94761 1208 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 ITGB3P05106 788 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 H2AFZP0C0S5 128 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 GZMAP12544 262 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 KCNE1P15382 129 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 ATICP31939 592 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 CDK7P50613 346 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 TRPC3Q13507 836 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 FBXO47Q5MNV8 452 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 PAPD7Q5XG87 772 aaKnown RBP12.6□□□□□ -0.39
CSTF3-205ENST00000524775 H2AFVQ71UI9 128 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 SH3TC2Q8TF17 1288 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
CSTF3-205ENST00000524775 NAPGQ99747 312 aaPredicted RBP12.6□□□□□ -0.39
CSTF3-205ENST00000524775 ZSWIM1Q9BR11 485 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 PAK6Q9NQU5 681 aaPredicted RBP12.6□□□□□ -0.39
CSTF3-205ENST00000524775 DPP3Q9NY33 737 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 ITGA11Q9UKX5 1188 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 IPPQ9Y573 584 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 PCDHB4Q9Y5E5 795 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 MRFAP1Q9Y605 127 aa12.6□□□□□ -0.39
CSTF3-205ENST00000524775 ANO9A1A5B4 782 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 PPEF2O14830 753 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 MGEA5O60502 916 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 RTN2O75298 545 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 RPS6KA5O75582 802 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 CFHP08603 1231 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 UNGP13051 313 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 KRT5P13647 590 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 AKAP5P24588 427 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 BPIFB4P59827 614 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 LPIN1Q14693 890 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 ZNF699Q32M78 642 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 TAF3Q5VWG9 929 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 MRPL10Q7Z7H8 261 aaKnown RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 TXLNBQ8N3L3 684 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 LRRC57Q8N9N7 239 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 RBBP8NLQ8NC74 664 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 LRRN4CLQ8ND94 238 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 C18orf25Q96B23 403 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 ARHGEF26Q96DR7 871 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 TSPAN18Q96SJ8 248 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 LUC7LQ9NQ29 371 aaKnown RBP12.59□□□□□ -0.39
CSTF3-205ENST00000524775 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 PCDHB2Q9Y5E7 798 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 PCDHGC5Q9Y5F6 944 aa12.59□□□□□ -0.39
CSTF3-205ENST00000524775 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 CTAGE9A4FU28 777 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 ANKRD62A6NC57 917 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 M0QZ92 97 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 BUB1O43683 1085 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 CAND2O75155 1236 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 TACC1O75410 805 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 URI1O94763 535 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-205ENST00000524775 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-205ENST00000524775 CYP1A1P04798 512 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-205ENST00000524775 ATP1A1P05023 1023 aaKnown RBP12.58□□□□□ -0.4
CSTF3-205ENST00000524775 CTSHP09668 335 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 WEE2P0C1S8 567 aa12.58□□□□□ -0.4
CSTF3-205ENST00000524775 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
CSTF3-205ENST00000524775 THPOP40225 353 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms