RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 EXD1Q8NHP7 514 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 MAGEC3Q8TD91 643 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 DYDC1Q8WWB3 177 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 ARHGEF2Q92974 986 aaKnown RBP9.49□□□□□ -0.89
PKP3-202ENST00000524646 FNBP1Q96RU3 617 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 PLCD4Q9BRC7 762 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
PKP3-202ENST00000524646 CYP26B1Q9NR63 512 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 STK32BQ9NY57 414 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 KCNG1Q9UIX4 513 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 ANAPC5Q9UJX4 755 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 R3HDM2Q9Y2K5 976 aaKnown RBP9.49□□□□□ -0.89
PKP3-202ENST00000524646 NEU2Q9Y3R4 380 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 STYXL1Q9Y6J8 313 aa9.49□□□□□ -0.89
PKP3-202ENST00000524646 VWA5AO00534 786 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 NDC80O14777 642 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 MAFGO15525 162 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 SNX3O60493 162 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ATP2C2O75185 946 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 STAM2O75886 525 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 VNN1O95497 513 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 C4BPAP04003 597 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 NR3C2P08235 984 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 GNA15P30679 374 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 RDXP35241 583 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 NLRP11P59045 1033 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 TAS2R40P59535 323 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 NOP14P78316 857 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 STRN3Q13033 797 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 STAT4Q14765 748 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 NBPF9Q3BBW0 867 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 SUPT20HL1Q3ZLR7 823 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 PREPLQ4J6C6 727 aaPredicted RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 XKR3Q5GH77 459 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 PLEKHA7Q6IQ23 1121 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 MIS18BP1Q6P0N0 1132 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ZNF365Q70YC5 407 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 TRPM8Q7Z2W7 1104 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ABRAQ8N0Z2 381 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ZCCHC9Q8N567 271 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 CCDC89Q8N998 374 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 CCDC63Q8NA47 563 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ATL2Q8NHH9 583 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 CCHCR1Q8TD31 782 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 CKAP2Q8WWK9 683 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 CPA5Q8WXQ8 436 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ZNF516Q92618 1163 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ZKSCAN4Q969J2 545 aaPredicted RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 ELMO3Q96BJ8 720 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 RBM41Q96IZ5 413 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 VCPIP1Q96JH7 1222 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 FAM84AQ96KN4 292 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 SCLT1Q96NL6 688 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ELAC2Q9BQ52 826 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 TACO1Q9BSH4 297 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 OSBPL8Q9BZF1 889 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 MAF1Q9H063 256 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 MYOZ2Q9NPC6 264 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ABCF3Q9NUQ8 709 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 SLC9A2Q9UBY0 812 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 TPX2Q9ULW0 747 aaKnown RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 CNTN6Q9UQ52 1028 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 USP15Q9Y4E8 981 aaPredicted RBP9.48□□□□□ -0.89
PKP3-202ENST00000524646 PCDHB4Q9Y5E5 795 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 ACTL7BQ9Y614 415 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 PTPRJQ12913 1337 aa9.48□□□□□ -0.89
PKP3-202ENST00000524646 PLXNA1Q9UIW2 1896 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 CDH16O75309 829 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 SUN1O94901 812 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 OATP04181 439 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 KRT1P04264 644 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 TNNI1P19237 187 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 KLRC2P26717 231 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 PTPN7P35236 360 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 GJC1P36383 396 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 ADCY8P40145 1251 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 CETN2P41208 172 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 NAMPTP43490 491 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 VPS41P49754 854 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 ZNF132P52740 706 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 POLGP54098 1239 aaPredicted RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 WNT7BP56706 349 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 ZNF280AP59817 542 aaPredicted RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 ACTR2P61160 394 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 NCALDP61601 193 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 LMNB2Q03252 620 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 CXCL9Q07325 125 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 MCL1Q07820 350 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 TRIP13Q15645 432 aaPredicted RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 GNPTABQ3T906 1256 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 MTERF2Q49AM1 385 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 LMBRD2Q68DH5 695 aaPredicted RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 CIAPIN1Q6FI81 312 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 SMYD5Q6GMV2 418 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 SLFN12LQ6IEE8 588 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 SNRNP48Q6IEG0 339 aaKnown RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 SPOPLQ6IQ16 392 aa9.47□□□□□ -0.89
PKP3-202ENST00000524646 HIBCHQ6NVY1 386 aaPredicted RBP9.47□□□□□ -0.89
PKP3-202ENST00000524646 LLGL2Q6P1M3 1020 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms