RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 TMOD4Q9NZQ9 345 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 IP6K2Q9UHH9 426 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 HACL1Q9UJ83 578 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 NOVA2Q9UNW9 492 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 RIPK3Q9Y572 518 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ZNFX1Q9P2E3 1918 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 IGKV6-21A0A0C4DH24 114 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ADCY3O60266 1144 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 FAM189A1O60320 539 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MAFO75444 373 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 VNN1O95497 513 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 CALB1P05937 261 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 TSHRP16473 764 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 DRD4P21917 467 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 GLRA2P23416 452 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 NSFP46459 744 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 SLC26A2P50443 739 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MAGOHP61326 146 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ACTN3Q08043 901 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 IFFO1Q0D2I5 559 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 NR1H3Q13133 447 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ZNF211Q13398 564 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 NEDD9Q14511 834 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 EAPPQ56P03 285 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ZC3H12AQ5D1E8 599 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 TDRD10Q5VZ19 366 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 FAM160B1Q5W0V3 765 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 NSMFQ6X4W1 530 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 PIGWQ7Z7B1 504 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 TDRPQ86YL5 185 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 CCDC89Q8N998 374 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MAGEC3Q8TD91 643 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ATXN2LQ8WWM7 1075 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 TCP11Q8WWU5 503 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 RAPGEF5Q92565 580 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 GLG1Q92896 1179 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 SAAL1Q96ER3 474 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 CHMP6Q96FZ7 201 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 FNBP1Q96RU3 617 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 JPH2Q9BR39 696 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 C2orf40Q9H1Z8 148 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 DPH5Q9H2P9 285 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ZNF302Q9NR11 478 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ADARB2Q9NS39 739 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 PARVAQ9NVD7 372 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ATP8A1Q9Y2Q0 1164 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 SLC45A1Q9Y2W3 748 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 SNX24Q9Y343 169 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 GOLGA8IPA6NC78 632 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 GOLGA8JA6NMD2 632 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 SPDYE16A6NNV3 312 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 TRIM66O15016 1216 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ATP4AP20648 1035 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 PROZP22891 400 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MMP8P22894 467 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 EIF4BP23588 611 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 CETN2P41208 172 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MARCKSL1P49006 195 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 GMPSP49915 693 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ATP1A2P50993 1020 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 PLTPP55058 493 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 YWHAEP62258 255 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MKRN3Q13064 507 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MAMLD1Q13495 774 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 IER5Q5VY09 327 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 USP50Q70EL3 339 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 PLPPR4Q7Z2D5 763 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 POLNQ7Z5Q5 900 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 MICALL2Q8IY33 904 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 C10orf67Q8IYJ2 551 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 CCDC105Q8IYK2 499 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 OTUD6BQ8N6M0 293 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 RBM41Q96IZ5 413 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 HINFPQ9BQA5 517 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 FAM213AQ9BRX8 229 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 LHX5Q9H2C1 402 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 UBN1Q9NPG3 1134 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 DDX56Q9NY93 547 aaKnown RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 SEPT9Q9UHD8 586 aaPredicted RBP5.81□□□□□ -1.48
CLINT1-208ENST00000524306 ANAPC7Q9UJX3 599 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 KIAA1217Q5T5P2 1943 aa5.81□□□□□ -1.48
CLINT1-208ENST00000524306 RASGRF2O14827 1237 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 RGS16O15492 202 aaPredicted RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 CAND2O75155 1236 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 DNAJC8O75937 253 aaPredicted RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 TTC4O95801 387 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 ASS1P00966 412 aaKnown RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 POLGP54098 1239 aaPredicted RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 AUHQ13825 339 aaKnown RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 MXD4Q14582 209 aaPredicted RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 STAT4Q14765 748 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 ACAP1Q15027 740 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 TAZQ16635 292 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 KYAT1Q16773 422 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 SGO2Q562F6 1265 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 PPP1R15BQ5SWA1 713 aa5.8□□□□□ -1.48
CLINT1-208ENST00000524306 SWT1Q5T5J6 900 aaKnown RBP5.8□□□□□ -1.48
CLINT1-208ENST00000524306 GKAP1Q5VSY0 366 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms