RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 E7EVH7 732 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ZBTB5O15062 677 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 CHUKO15111 745 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 DYNC1LI2O43237 492 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 CALUO43852 315 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 TIMP1P01033 207 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 H2AFZP0C0S5 128 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 TMEM253P0C7T8 217 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 SPATA31C1P0DKV0 1188 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 NR2F2P24468 414 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 EIF3BP55884 814 aaKnown RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 PTENP60484 403 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 FPGSQ05932 587 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 PDE4CQ08493 712 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 AP3B2Q13367 1082 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 XRCC4Q13426 336 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ADAM9Q13443 819 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 BAATQ14032 418 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 HLTFQ14527 1009 aaKnown RBP eCLIP8.4□□□□□ -1.062e-7■□□□□ 8.5
SPIDR-223ENST00000524033 EXOC3L4Q17RC7 722 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 MAP7D1Q3KQU3 841 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 Q4G0T1 1027 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 TNFAIP8L3Q5GJ75 292 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 GPATCH4Q5T3I0 446 aaKnown RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ERMARDQ5T6L9 678 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 SYDE2Q5VT97 1194 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ZDHHC24Q6UX98 284 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 H2AFVQ71UI9 128 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 FAM228AQ86W67 206 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 SYCE1Q8N0S2 351 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 RFFLQ8WZ73 363 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 CCT6BQ92526 530 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 RAPGEF5Q92565 580 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 SLC35C1Q96A29 364 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 LENG9Q96B70 501 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 SEC16BQ96JE7 1060 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ZNF317Q96PQ6 595 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 TMEM109Q9BVC6 243 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 FAM129AQ9BZQ8 928 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 GPR88Q9GZN0 384 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 KATNBL1Q9H079 304 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 DDX47Q9H0S4 455 aaKnown RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 UPF3AQ9H1J1 476 aaKnown RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 RANBP17Q9H2T7 1088 aaKnown RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 CCDC134Q9H6E4 229 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 CNOT10Q9H9A5 744 aaKnown RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 TBC1D7Q9P0N9 293 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ARMCX3Q9UH62 379 aaPredicted RBP8.4□□□□□ -1.06
SPIDR-223ENST00000524033 MCM8Q9UJA3 840 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 PCDHA12Q9UN75 941 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 KIAA1024Q9UPX6 916 aa8.4□□□□□ -1.06
SPIDR-223ENST00000524033 ARVCFO00192 962 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 EIF3DO15371 548 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 TTI1O43156 1089 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 DAPK3O43293 454 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 CABYRO75952 493 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 AKAP3O75969 853 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 NR3C1P04150 777 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 GSTA1P08263 222 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 RPA1P27694 616 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 CIITAP33076 1130 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 CTNNA1P35221 906 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 DNA2P51530 1060 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 MRPL12P52815 198 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 GALCP54803 685 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 DRG2P55039 364 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 NKX3-2P78367 333 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 SMAD3P84022 425 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 BEX3Q00994 111 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 IFT88Q13099 833 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 NCOA4Q13772 614 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 PPP2R5EQ16537 467 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 FSCN1Q16658 493 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 MFSD5Q6N075 450 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 TAPT1Q6NXT6 567 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 CCDC121Q6ZUS5 278 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 PEX26Q7Z412 305 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 TLK2Q86UE8 772 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 SLFN12Q8IYM2 578 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 CCDC26Q8TAB7 109 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 ATXN2LQ8WWM7 1075 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 GJA10Q969M2 543 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 XPO6Q96QU8 1125 aaKnown RBP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 SPAG5Q96R06 1193 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 REEP2Q9BRK0 252 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 MKNK1Q9BUB5 465 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPIDR-223ENST00000524033 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 CARD9Q9H257 536 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 ADAM7Q9H2U9 754 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 PDGFCQ9NRA1 345 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 OLFML3Q9NRN5 406 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 KLC4Q9NSK0 619 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 PNMA2Q9UL42 364 aa8.39□□□□□ -1.07
SPIDR-223ENST00000524033 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms