RNA–Protein interactions for RNA: ENST00000523944.5

MCM4-215, Transcript of minichromosome maintenance complex component 4, human

APPRIS P1 TSL 2 BASIC

Gene MCM4, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCM4-215	ENST00000523944	FGFR1OP2	Q9NVK5	253 aa		13.53	□□□□□ -0.24
MCM4-215	ENST00000523944	BCL9L	Q86UU0	1499 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944		A8MXQ7	604 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	XPOT	O43592	962 aa	Known RBP	13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	CRCP	O75575	148 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	HSPA9	P38646	679 aa	Known RBP	13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	MAPK7	Q13164	816 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	PARP9	Q8IXQ6	854 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	ZSWIM1	Q9BR11	485 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	KIAA1683	Q9H0B3	1180 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	DHX35	Q9H5Z1	703 aa	Known RBP	13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	GTF3C4	Q9UKN8	822 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	FRMPD4	Q14CM0	1322 aa		13.52	□□□□□ -0.24
MCM4-215	ENST00000523944	SDC4	P31431	198 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	RAPH1	Q70E73	1250 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	APTX	Q7Z2E3	356 aa	Known RBP	13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	C4orf19	Q8IY42	314 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	RAB3IL1	Q8TBN0	382 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	ATP8B4	Q8TF62	1192 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	PPP1R13L	Q8WUF5	828 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	LCMT1	Q9UIC8	334 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	IQANK1	A0A1B0GTG1	560 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	TMEM120B	A0PK00	339 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	PABPN1L	A6NDY0	278 aa	Known RBP	13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	ERVK-9	P63128	1117 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	CDR2	Q01850	454 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	KCNT1	Q5JUK3	1230 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	GLRA4	Q5JXX5	417 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	DCLK2	Q8N568	766 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	KLF6	Q99612	283 aa	Predicted RBP	13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	DDX23	Q9BUQ8	820 aa	Known RBP	13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	KCTD10	Q9H3F6	313 aa		13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.52	□□□□□ -0.25
MCM4-215	ENST00000523944	COPE	O14579	308 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	MAFG	O15525	162 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	CREB3	O43889	395 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	SUPT20HL2	P0C7V6	817 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	LY6K	Q17RY6	165 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	ATF7IP2	Q5U623	682 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	DSTYK	Q6XUX3	929 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	HIPK4	Q8NE63	616 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	HSD17B14	Q9BPX1	270 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TRAIP	Q9BWF2	469 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TRIM55	Q9BYV6	548 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	ECT2	Q9H8V3	914 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	A1CF	Q9NQ94	594 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	NOP53	Q9NZM5	478 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	KIT	P10721	976 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	RPS12	P25398	132 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	BCAR1	P56945	870 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TATDN1	Q6P1N9	297 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TRIM72	Q6ZMU5	477 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	KRT35	Q92764	455 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	GBP5	Q96PP8	586 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	SLC13A1	Q9BZW2	595 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TGFB1I1	O43294	461 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TLR2	O60603	784 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	OPHN1	O60890	802 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	CAND2	O75155	1236 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	CDH16	O75309	829 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	KRT37	O76014	449 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	RARB	P10826	455 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	LCP1	P13796	627 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	COIL	P38432	576 aa	Predicted RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	ITGA8	P53708	1063 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	PPAT	Q06203	517 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	TRADD	Q15628	312 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	AMHR2	Q16671	573 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	AGBL2	Q5U5Z8	902 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	ACAD10	Q6JQN1	1059 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	CCDC33	Q8N5R6	958 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	EPS8L3	Q8TE67	593 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	GAN	Q9H2C0	597 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	RANBP17	Q9H2T7	1088 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	PABPC3	Q9H361	631 aa	Known RBP	13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	ASNSD1	Q9NWL6	643 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	LRRC37A3	O60309	1634 aa		13.51	□□□□□ -0.25
MCM4-215	ENST00000523944	PDGFRA	P16234	1089 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	RNASEL	Q05823	741 aa	Known RBP	13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	CYP24A1	Q07973	514 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	CUL2	Q13617	745 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	KDM7A	Q6ZMT4	941 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	CYTH2	Q99418	400 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	IFT122	Q9HBG6	1241 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	RNF19A	Q9NV58	838 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	STRIP2	Q9ULQ0	834 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	NKRF	O15226	690 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	P4HA2	O15460	535 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	TFDP2	Q14188	446 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	PDZD4	Q76G19	769 aa	Predicted RBP	13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	SPATA21	Q7Z572	469 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	TTC13	Q8NBP0	860 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	SLC16A10	Q8TF71	515 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	CCT6B	Q92526	530 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	SENP7	Q9BQF6	1050 aa		13.5	□□□□□ -0.25
MCM4-215	ENST00000523944	TRABD	Q9H4I3	376 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms