RNA–Protein interactions for RNA: ENST00000523939.1

ALKAL1-202, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALKAL1, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-202ENST00000523939 PTPROQ16827 1216 aa20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 INTS8Q75QN2 995 aaKnown RBP20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 FAM186BQ8IYM0 893 aa20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 MRPL43Q8N983 215 aaKnown RBP20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 CCDC127Q96BQ5 260 aa20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 GAS2L1Q99501 681 aaPredicted RBP20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 FUCA2Q9BTY2 467 aa20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 MTMR12Q9C0I1 747 aa20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 NGRNQ9NPE2 291 aaKnown RBP20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 ITGA11Q9UKX5 1188 aa20.88■□□□□ 0.93
ALKAL1-202ENST00000523939 SF3B1O75533 1304 aaKnown RBP eCLIP20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 M0QZQ0 153 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 BRCC3P46736 316 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 MARSP56192 900 aaKnown RBP20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 STX17P56962 302 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 BFSP1Q12934 665 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 COL19A1Q14993 1142 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 SKOR2Q2VWA4 1001 aaPredicted RBP20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 TIGD5Q53EQ6 642 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 LMBRD2Q68DH5 695 aaPredicted RBP20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 TRAPPC11Q7Z392 1133 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 IRF2BP1Q8IU81 584 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 HASPINQ8TF76 798 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 SUSD3Q96L08 255 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 PCDHGC5Q9Y5F6 944 aa20.87■□□□□ 0.93
ALKAL1-202ENST00000523939 C2orf71A6NGG8 1288 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 CST3P01034 146 aaPredicted RBP20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 DLATP10515 647 aaKnown RBP20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 VAMP7P51809 220 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 AP3M2P53677 418 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 ELAVL2Q12926 359 aaKnown RBP20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 MRPL58Q14197 206 aaKnown RBP20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 PTPN14Q15678 1187 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 LRRC52Q8N7C0 313 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 FNBP1Q96RU3 617 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 TCF25Q9BQ70 676 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 RXFP1Q9HBX9 757 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 STXBP5LQ9Y2K9 1186 aa20.86■□□□□ 0.93
ALKAL1-202ENST00000523939 COL6A3P12111 3177 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 HIDE1A8MVS5 230 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 ITGB3P05106 788 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 FOSL2P15408 326 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 PPP3CAQ08209 521 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 KCNC3Q14003 757 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 USP41Q3LFD5 358 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 ZACNQ401N2 412 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 RTP2Q5QGT7 225 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 FRMD5Q7Z6J6 570 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 CSGALNACT2Q8N6G5 542 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 SYAP1Q96A49 352 aaPredicted RBP20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 ANKRD36BP1Q96IX9 119 aa20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 SPTBN5Q9NRC6 3674 aaKnown RBP20.85■□□□□ 0.93
ALKAL1-202ENST00000523939 VWA8A3KMH1 1905 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 XIRP2A4UGR9 3374 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 TRAPPC3O43617 180 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 TBC1D4O60343 1298 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 VNN1O95497 513 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 CXCL14O95715 111 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 STAU1O95793 577 aaKnown RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 TNNC2P02585 160 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 TMEM191BP0C7N4 346 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 TNNI1P19237 187 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 POLR2BP30876 1174 aaKnown RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 RBP5P82980 135 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 SMC1AQ14683 1233 aaKnown RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 FAM171A1Q5VUB5 890 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 TDRD10Q5VZ19 366 aaKnown RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 SASS6Q6UVJ0 657 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 ADGRD2Q7Z7M1 963 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 LNX1Q8TBB1 728 aaPredicted RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 PIK3R5Q8WYR1 880 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 B3GALT6Q96L58 329 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 SRRTQ9BXP5 876 aaKnown RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 XYLT2Q9H1B5 865 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 NSUN3Q9H649 340 aaKnown RBP20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 DACH1Q9UI36 760 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
ALKAL1-202ENST00000523939 SCN1AP35498 2009 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 I3L4J1 428 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 SYN3O14994 580 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 LETM1O95202 739 aaPredicted RBP20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 EPB41P11171 864 aaKnown RBP20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 IGFBP4P22692 258 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 GTF2H1P32780 548 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 C11orf57Q6ZUT1 292 aaPredicted RBP20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 SV2AQ7L0J3 742 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 TMC7Q7Z402 723 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 AUTS2Q8WXX7 1259 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 SLC35C1Q96A29 364 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 TTPALQ9BTX7 342 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 VRTNQ9H8Y1 702 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 METTL14Q9HCE5 456 aaKnown RBP20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 ANO10Q9NW15 660 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 GDAP2Q9NXN4 497 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 FNIP2Q9P278 1114 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 PCDHB8Q9UN66 801 aa20.83■□□□□ 0.93
ALKAL1-202ENST00000523939 CYP11A1P05108 521 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms