RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 CITO14578 2027 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 ANK1P16157 1881 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 A0A1W2PQC6 194 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 TLL1O43897 1013 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 ZC3H11AO75152 810 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDK16-221ENST00000523543 PHACTR2O75167 634 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 CST3P01034 146 aaPredicted RBP12.06□□□□□ -0.48
CDK16-221ENST00000523543 TPM3P06753 285 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 PON1P27169 355 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 ATICP31939 592 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 PNPLA4P41247 253 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 SLC11A1P49279 550 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 AARSP49588 968 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDK16-221ENST00000523543 CLCNKBP51801 687 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 MYL6P60660 151 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 KCNMA1Q12791 1236 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 TRPC3Q13507 836 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 DPY19L2P1Q6NXN4 242 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 TDHQ8IZJ6 230 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 TAF4BQ92750 862 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 CLP1Q92989 425 aaKnown RBP12.06□□□□□ -0.48
CDK16-221ENST00000523543 ZNF560Q96MR9 790 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 ZBED2Q9BTP6 218 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 INTS2Q9H0H0 1204 aaKnown RBP12.06□□□□□ -0.48
CDK16-221ENST00000523543 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 DNAJB4Q9UDY4 337 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 AGAP1Q9UPQ3 857 aa12.06□□□□□ -0.48
CDK16-221ENST00000523543 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
CDK16-221ENST00000523543 PTPRSQ13332 1948 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 LCHNA4D1U4 455 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 CARNS1A5YM72 827 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 SPTLC1O15269 473 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 LRRN2O75325 713 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 GALTP07902 379 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 KRT19P08727 400 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 LAG3P18627 525 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 PAX3P23760 479 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 ZNF75DP51815 510 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 BCAR1P56945 870 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 NOP14P78316 857 aaKnown RBP12.05□□□□□ -0.48
CDK16-221ENST00000523543 SYCP1Q15431 976 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 SGSM1Q2NKQ1 1148 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 TRIM65Q6PJ69 517 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 DCLRE1AQ6PJP8 1040 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 CD300LGQ6UXG3 332 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 FIBCD1Q8N539 461 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 C3orf58Q8NDZ4 430 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 MRFAP1L1Q96HT8 127 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 HPDLQ96IR7 371 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 FAXDC2Q96IV6 333 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 FAM193BQ96PV7 902 aaPredicted RBP12.05□□□□□ -0.48
CDK16-221ENST00000523543 IMPG2Q9BZV3 1241 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 TRIM5Q9C035 493 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 APOBEC3GQ9HC16 384 aaKnown RBP12.05□□□□□ -0.48
CDK16-221ENST00000523543 PLCB1Q9NQ66 1216 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 MARCH5Q9NX47 278 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 PCDHA11Q9Y5I1 949 aa12.05□□□□□ -0.48
CDK16-221ENST00000523543 PDCD11Q14690 1871 aaKnown RBP12.04□□□□□ -0.48
CDK16-221ENST00000523543 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 F8W810 466 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 NRP1O14786 923 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 B3GAT3O94766 335 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 KIF4AO95239 1232 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 ITGB1P05556 798 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 SLC9A1P19634 815 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 IGFBP6P24592 240 aaPredicted RBP12.04□□□□□ -0.48
CDK16-221ENST00000523543 OR1G1P47890 313 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 TAF6P49848 677 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 MRE11P49959 708 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 RABGGTBP53611 331 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 LILRA4P59901 499 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 MYO1EQ12965 1108 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 SV2CQ496J9 727 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 LIMS2Q7Z4I7 341 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 ZNF558Q96NG5 402 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 PI4K2AQ9BTU6 479 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
CDK16-221ENST00000523543 GANQ9H2C0 597 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 SIX2Q9NPC8 291 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 GDAP2Q9NXN4 497 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 APEX2Q9UBZ4 518 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 PRG3Q9Y2Y8 225 aaPredicted RBP12.04□□□□□ -0.48
CDK16-221ENST00000523543 R3HCC1Q9Y3T6 440 aaKnown RBP12.04□□□□□ -0.48
CDK16-221ENST00000523543 ITIH6Q6UXX5 1313 aa12.04□□□□□ -0.48
CDK16-221ENST00000523543 FNDC1Q4ZHG4 1894 aaPredicted RBP12.04□□□□□ -0.48
CDK16-221ENST00000523543 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.03□□□□□ -0.48
CDK16-221ENST00000523543 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.03□□□□□ -0.48
CDK16-221ENST00000523543 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
CDK16-221ENST00000523543 NOL4O94818 638 aa12.03□□□□□ -0.48
CDK16-221ENST00000523543 EFEMP2O95967 443 aa12.03□□□□□ -0.48
CDK16-221ENST00000523543 ALDH2P05091 517 aa12.03□□□□□ -0.48
CDK16-221ENST00000523543 PBX3P40426 434 aa12.03□□□□□ -0.48
CDK16-221ENST00000523543 ALDH7A1P49419 539 aaKnown RBP12.03□□□□□ -0.48
CDK16-221ENST00000523543 KLK7P49862 253 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms