RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CHPT1Q8WUD6 406 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 ATP6V1E2Q96A05 226 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 TSNARE1Q96NA8 513 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 VPS35Q96QK1 796 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 CCDC77Q9BR77 488 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 AGXT2Q9BYV1 514 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 THAP9Q9H5L6 903 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 IFT22Q9H7X7 185 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 CUEDC1Q9NWM3 386 aaPredicted RBP8.74□□□□□ -1.01
HMGB4-204ENST00000522796 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.74□□□□□ -1.01
HMGB4-204ENST00000522796 GGT7Q9UJ14 662 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 GRID1Q9ULK0 1009 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 DNM3Q9UQ16 869 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 STXBP5LQ9Y2K9 1186 aa8.74□□□□□ -1.01
HMGB4-204ENST00000522796 LRRC7Q96NW7 1537 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ADCY6O43306 1168 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 RNASEH1O60930 286 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 RSL1D1O76021 490 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 NDUFA10O95299 355 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 IL33O95760 270 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ALOX5P09917 674 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 RARBP10826 455 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 AXLP30530 894 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 MMP13P45452 471 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 NEK3P51956 506 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 SQLEQ14534 574 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 SSPNQ14714 243 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 C16orf72Q14CZ0 275 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 GRIK5Q16478 980 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 KIAA1841Q6NSI8 718 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 CRTC1Q6UUV9 634 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ERI1Q8IV48 349 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ADSSL1Q8N142 457 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ALLCQ8N6M5 410 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 PCYOX1LQ8NBM8 494 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 PJA1Q8NG27 643 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ZNF606Q8WXB4 792 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 OSBPL6Q9BZF3 934 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 RNF38Q9H0F5 515 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 VPS16Q9H269 839 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TLE6Q9H808 572 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ABHD10Q9NUJ1 306 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 PRKAG3Q9UGI9 489 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 RABGEF1Q9UJ41 708 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 SLC8A2Q9UPR5 921 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 MAGI3Q5TCQ9 1506 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 SFI1A8K8P3 1242 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TRAFD1O14545 582 aaPredicted RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TNFRSF10BO14763 440 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 CAPN9O14815 690 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 HEXIM1O94992 359 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TFPTP0C1Z6 253 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 P4HA1P13674 534 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TCP1P17987 556 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 IGHMBP2P38935 993 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 HNRNPDQ14103 355 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 CWF19L2Q2TBE0 894 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 KHDC1Q4VXA5 237 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TIGD2Q4W5G0 525 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 SPDYAQ5MJ70 313 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TTBK2Q6IQ55 1244 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ARHGAP36Q6ZRI8 547 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 PRR23CQ6ZRP0 262 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 MRPL10Q7Z7H8 261 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ZER1Q7Z7L7 766 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 NKAIN3Q8N8D7 197 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 FAM149B1Q96BN6 582 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 CEP19Q96LK0 163 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 OLFM1Q99784 485 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 EPB41L5Q9HCM4 733 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 MAN1C1Q9NR34 630 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 DBF4Q9UBU7 674 aaPredicted RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 ANAPC5Q9UJX4 755 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 TRIM35Q9UPQ4 493 aa8.73□□□□□ -1.01
HMGB4-204ENST00000522796 REXO2Q9Y3B8 237 aaKnown RBP8.73□□□□□ -1.01
HMGB4-204ENST00000522796 NPHP3-ACAD11A0A0J9YXS1 232 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 F8W810 466 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 TRDMT1O14717 391 aaKnown RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 APOL1O14791 398 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 GPC4O75487 556 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 MARK3P27448 753 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CRABP2P29373 138 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CD86P42081 329 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ADAM17P78536 824 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ACVR2BQ13705 512 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 DSC3Q14574 896 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 RFTN1Q14699 578 aaPredicted RBP8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ZNF124Q15973 351 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 ZNF792Q3KQV3 632 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 IDO2Q6ZQW0 420 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 C4orf50Q6ZRC1 276 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 FAM47EQ6ZV65 393 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 CENPSQ8N2Z9 138 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 KCNH5Q8NCM2 988 aa8.72□□□□□ -1.01
HMGB4-204ENST00000522796 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms