RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 RPN1P04843 607 aaKnown RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 SRGAP2BP0DMP2 458 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 ELAVL2Q12926 359 aaKnown RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 SNW1Q13573 536 aaKnown RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 BMT2Q1RMZ1 405 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 VARS2Q5ST30 1063 aaKnown RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 LMBRD2Q68DH5 695 aaPredicted RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 LILRA6Q6PI73 481 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 STXBP4Q6ZWJ1 553 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 PPFIBP1Q86W92 1011 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 ENGASEQ8NFI3 743 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 ERCC4Q92889 916 aaPredicted RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 SUSD3Q96L08 255 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 POMKQ9H5K3 350 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 PDE11AQ9HCR9 933 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 RBAKQ9NYW8 714 aaPredicted RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 HSPBP1Q9NZL4 362 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 MTRRQ9UBK8 725 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 CIZ1Q9ULV3 898 aaPredicted RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 SSX2IPQ9Y2D8 614 aa19.37■□□□□ 0.69
CLK4-211ENST00000522556 TIMM13Q9Y5L4 95 aaPredicted RBP19.37■□□□□ 0.69
CLK4-211ENST00000522556 UBE4BO95155 1302 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 TNFRSF10AO00220 468 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 HOXB8P17481 243 aaPredicted RBP19.36■□□□□ 0.69
CLK4-211ENST00000522556 CYP3A5P20815 502 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 AARSP49588 968 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLK4-211ENST00000522556 CYP2J2P51589 502 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 PNOCQ13519 176 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 C9orf57Q5W0N0 161 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 ADHFE1Q8IWW8 467 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 GPR65Q8IYL9 337 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 GPD1LQ8N335 351 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 ADAM7Q9H2U9 754 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 ASB7Q9H672 318 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLK4-211ENST00000522556 DZANK1Q9NVP4 752 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 C2CD2Q9Y426 696 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 CDY1Q9Y6F8 540 aa19.36■□□□□ 0.69
CLK4-211ENST00000522556 ANO9A1A5B4 782 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 OR1D2P34982 312 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 ANP32AP39687 249 aaKnown RBP19.35■□□□□ 0.69
CLK4-211ENST00000522556 CBX2Q14781 532 aaPredicted RBP19.35■□□□□ 0.69
CLK4-211ENST00000522556 CD302Q8IX05 232 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 GJD3Q8N144 294 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 BEST2Q8NFU1 509 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 SFXN1Q9H9B4 322 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 DERAQ9Y315 318 aa19.35■□□□□ 0.69
CLK4-211ENST00000522556 C19orf67A6NJJ6 358 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 PIRO00625 290 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 TBC1D4O60343 1298 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 SSTR3P32745 418 aaPredicted RBP19.34■□□□□ 0.69
CLK4-211ENST00000522556 TFAMQ00059 246 aaKnown RBP19.34■□□□□ 0.69
CLK4-211ENST00000522556 KNOP1Q1ED39 458 aaKnown RBP19.34■□□□□ 0.69
CLK4-211ENST00000522556 RDH13Q8NBN7 331 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 ZNF707Q96C28 371 aaPredicted RBP19.34■□□□□ 0.69
CLK4-211ENST00000522556 GZF1Q9H116 711 aaPredicted RBP19.34■□□□□ 0.69
CLK4-211ENST00000522556 DPP3Q9NY33 737 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 FBXW11Q9UKB1 542 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 MAPK8IP1Q9UQF2 711 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 FAM50BQ9Y247 325 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 NCOR1O75376 2440 aa19.34■□□□□ 0.69
CLK4-211ENST00000522556 SPDYE4A6NLX3 237 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 M0QZQ0 153 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 SYN3O14994 580 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 XPOTO43592 962 aaKnown RBP19.33■□□□□ 0.68
CLK4-211ENST00000522556 TRAPPC3O43617 180 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 IL18RAPO95256 599 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 LILRA4P59901 499 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 ROR1Q01973 937 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 MRPL58Q14197 206 aaKnown RBP19.33■□□□□ 0.68
CLK4-211ENST00000522556 SMYD4Q8IYR2 804 aaPredicted RBP19.33■□□□□ 0.68
CLK4-211ENST00000522556 C1orf127Q8N9H9 656 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 KREMEN2Q8NCW0 462 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 OR5B17Q8NGF7 314 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 CXorf38Q8TB03 319 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 RPGRIP1Q96KN7 1286 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 MTMR12Q9C0I1 747 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 KCTD10Q9H3F6 313 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 CHMP5Q9NZZ3 219 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 FBXL5Q9UKA1 691 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 PCDHB8Q9UN66 801 aa19.33■□□□□ 0.68
CLK4-211ENST00000522556 WDR27A2RRH5 827 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 GOLGA6L4A6NEF3 574 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 RHOBTB3O94955 611 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 LDHAP00338 332 aaKnown RBP19.32■□□□□ 0.68
CLK4-211ENST00000522556 MYL1P05976 194 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 OR4Q2P0C623 313 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 CDR1P51861 262 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 ARPP19P56211 112 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 POU5F1Q01860 360 aaKnown RBP19.32■□□□□ 0.68
CLK4-211ENST00000522556 CREMQ03060 361 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 FAM160A1Q05DH4 1040 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 ITIH3Q06033 890 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 RAB33AQ14088 237 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 ANKS3Q6ZW76 656 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 GPR149Q86SP6 731 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 PLEKHO2Q8TD55 490 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 TSPAN18Q96SJ8 248 aa19.32■□□□□ 0.68
CLK4-211ENST00000522556 PHF7Q9BWX1 381 aaPredicted RBP19.32■□□□□ 0.68
CLK4-211ENST00000522556 PRKAG3Q9UGI9 489 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms