RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 ZC3H11AO75152 810 aaKnown RBP eCLIP13.33□□□□□ -0.28
PABPC1-219ENST00000522387 DDHD2O94830 711 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 CSPG5O95196 566 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 TNNC2P02585 160 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 MYL6P60660 151 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 TRPC3Q13507 836 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 NYAP1Q6ZVC0 841 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 ZBED2Q9BTP6 218 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 TMEM8AQ9HCN3 771 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
PABPC1-219ENST00000522387 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 HLA-DRAP01903 254 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 SKIP12755 728 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 NCOA4Q13772 614 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 KYAT1Q16773 422 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 ZACNQ401N2 412 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 NOMO2Q5JPE7 1267 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 FAM109BQ6ICB4 259 aaPredicted RBP13.33□□□□□ -0.28
PABPC1-219ENST00000522387 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 TOP1MTQ969P6 601 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 LSM14BQ9BX40 385 aaKnown RBP13.33□□□□□ -0.28
PABPC1-219ENST00000522387 PLEKHA5Q9HAU0 1116 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 NLRC4Q9NPP4 1024 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 TBC1D13Q9NVG8 400 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 SIX4Q9UIU6 781 aa13.33□□□□□ -0.28
PABPC1-219ENST00000522387 PRG3Q9Y2Y8 225 aaPredicted RBP13.33□□□□□ -0.28
PABPC1-219ENST00000522387 SCN1AP35498 2009 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 I3L4J1 428 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 AMHP03971 560 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
PABPC1-219ENST00000522387 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
PABPC1-219ENST00000522387 PON1P27169 355 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 RABGGTBP53611 331 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
PABPC1-219ENST00000522387 CRIPAKQ8N1N5 446 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 TATDN2Q93075 761 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 PPP1R10Q96QC0 940 aaKnown RBP13.32□□□□□ -0.28
PABPC1-219ENST00000522387 LTBP2Q14767 1821 aa13.32□□□□□ -0.28
PABPC1-219ENST00000522387 TDRD15B5MCY1 1934 aaKnown RBP13.32□□□□□ -0.28
PABPC1-219ENST00000522387 ITGB1P05556 798 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 MYOGP15173 224 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 OR1G1P47890 313 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 CLDN10P78369 228 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 RAPGEF1Q13905 1077 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 SHHQ15465 462 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 GBP6Q6ZN66 633 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
PABPC1-219ENST00000522387 C3orf58Q8NDZ4 430 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 KAT5Q92993 513 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 CASD1Q96PB1 797 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 YME1L1Q96TA2 773 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 CBFA2T2O43439 604 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 PFKMP08237 780 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 GSDMDP57764 484 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 CETN1Q12798 172 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 ZBTB6Q15916 424 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 ARHGAP44Q17R89 818 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 PHLDB3Q6NSJ2 640 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 NPAS4Q8IUM7 802 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 ARHGEF19Q8IW93 802 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 BEST2Q8NFU1 509 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 FAM193BQ96PV7 902 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-219ENST00000522387 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
PABPC1-219ENST00000522387 AJAP1Q9UKB5 411 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-219ENST00000522387 SLC4A7Q9Y6M7 1214 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 COL6A3P12111 3177 aa13.31□□□□□ -0.28
PABPC1-219ENST00000522387 RNF225M0QZC1 329 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 DGKIO75912 1065 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 B3GAT3O94766 335 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 KCNE1P15382 129 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 ADKP55263 362 aaKnown RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 BCAR1P56945 870 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 POLR2FP61218 127 aaKnown RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 SURF1Q15526 300 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 NAB2Q15742 525 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 C15orf39Q6ZRI6 1047 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 URGCPQ8TCY9 931 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 APOBEC3GQ9HC16 384 aaKnown RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 MTUS1Q9ULD2 1270 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 UBQLN1Q9UMX0 589 aaKnown RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 POLIQ9UNA4 740 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 SIK3Q9Y2K2 1263 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 RAP1GAPP47736 663 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 EPC2Q52LR7 807 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 XKR4Q5GH76 650 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 PSRC1Q6PGN9 363 aaPredicted RBP13.3□□□□□ -0.28
PABPC1-219ENST00000522387 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
PABPC1-219ENST00000522387 LMO3Q8TAP4 145 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms