RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 BCAR1P56945 870 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 TRPC3Q13507 836 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 FILIP1LQ4L180 1135 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 SEMA4DQ92854 862 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 FAN1Q9Y2M0 1017 aa26.04■■□□□ 1.76
PVT1-212ENST00000521951 LRRN2O75325 713 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 PIK3CAP42336 1068 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 UBASH3AP57075 661 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 MYL6P60660 151 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 EPC2Q52LR7 807 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 DCLRE1AQ6PJP8 1040 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 RAB20Q9NX57 234 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 IFNKQ9P0W0 207 aa26.03■■□□□ 1.76
PVT1-212ENST00000521951 R3HCC1Q9Y3T6 440 aaKnown RBP26.03■■□□□ 1.76
PVT1-212ENST00000521951 RANBP2P49792 3224 aaKnown RBP26.03■■□□□ 1.76
PVT1-212ENST00000521951 GTPBP10A4D1E9 387 aaKnown RBP26.02■■□□□ 1.76
PVT1-212ENST00000521951 TEX33O43247 280 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 LINC00271P0C7V0 271 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 PBX3P40426 434 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 PLCB2Q00722 1185 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 CETN1Q12798 172 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 FKBP15Q5T1M5 1219 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 C3orf58Q8NDZ4 430 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 CLP1Q92989 425 aaKnown RBP26.02■■□□□ 1.76
PVT1-212ENST00000521951 CRACR2AQ9BSW2 395 aa26.02■■□□□ 1.76
PVT1-212ENST00000521951 YBX2Q9Y2T7 364 aaKnown RBP26.02■■□□□ 1.76
PVT1-212ENST00000521951 PRG3Q9Y2Y8 225 aaPredicted RBP26.02■■□□□ 1.76
PVT1-212ENST00000521951 NT5C1B-RDH14C9J2C7 533 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 F8W810 466 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 AP5Z1O43299 807 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 LAG3P18627 525 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 PBX2P40425 430 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 ALDH7A1P49419 539 aaKnown RBP26.01■■□□□ 1.75
PVT1-212ENST00000521951 UBXN1Q04323 297 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 NR1I3Q14994 352 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 KCNT2Q6UVM3 1135 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 CD300LGQ6UXG3 332 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 GBP6Q6ZN66 633 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 LRRC52Q8N7C0 313 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 COLGALT1Q8NBJ5 622 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 EHBP1Q8NDI1 1231 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 LMO3Q8TAP4 145 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 ZNF558Q96NG5 402 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 PBX4Q9BYU1 374 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 XYLT2Q9H1B5 865 aa26.01■■□□□ 1.75
PVT1-212ENST00000521951 LINC01553A4QN01 128 aa26■■□□□ 1.75
PVT1-212ENST00000521951 B3GAT3O94766 335 aa26■■□□□ 1.75
PVT1-212ENST00000521951 SGSM1Q2NKQ1 1148 aa26■■□□□ 1.75
PVT1-212ENST00000521951 SARM1Q6SZW1 724 aa26■■□□□ 1.75
PVT1-212ENST00000521951 ELMO3Q96BJ8 720 aa26■■□□□ 1.75
PVT1-212ENST00000521951 HPDLQ96IR7 371 aa26■■□□□ 1.75
PVT1-212ENST00000521951 PI4K2AQ9BTU6 479 aa26■■□□□ 1.75
PVT1-212ENST00000521951 COLEC11Q9BWP8 271 aa26■■□□□ 1.75
PVT1-212ENST00000521951 ARHGEF15O94989 841 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 KIF4AO95239 1232 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 ITGB1P05556 798 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 CA3P07451 260 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 ATICP31939 592 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 LILRA4P59901 499 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 KCNMA1Q12791 1236 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 EXOC3L4Q17RC7 722 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 ZNF560Q96MR9 790 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 XPO4Q9C0E2 1151 aaKnown RBP25.99■■□□□ 1.75
PVT1-212ENST00000521951 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.99■■□□□ 1.751e-6■■■■■ 79
PVT1-212ENST00000521951 AAASQ9NRG9 546 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 MARCH5Q9NX47 278 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 GCNT4Q9P109 453 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 COLQQ9Y215 455 aaPredicted RBP25.99■■□□□ 1.75
PVT1-212ENST00000521951 NLRC5Q86WI3 1866 aa25.99■■□□□ 1.75
PVT1-212ENST00000521951 FSD2A1L4K1 749 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 TMEM189-UBE2V1I3L0A0 370 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 SPTLC1O15269 473 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 ASS1P00966 412 aaKnown RBP25.98■■□□□ 1.75
PVT1-212ENST00000521951 SLC9A1P19634 815 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 PNPLA4P41247 253 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 TAF6P49848 677 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 MYO1EQ12965 1108 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 RAB30Q15771 203 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 HASPINQ8TF76 798 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 INTS2Q9H0H0 1204 aaKnown RBP25.98■■□□□ 1.75
PVT1-212ENST00000521951 MSRAQ9UJ68 235 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 GOLGA6L3A6NEY3 463 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 STAU1O95793 577 aaKnown RBP25.98■■□□□ 1.75
PVT1-212ENST00000521951 ZNF699Q32M78 642 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 SPOPLQ6IQ16 392 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 TMEM173Q86WV6 379 aaPredicted RBP25.98■■□□□ 1.75
PVT1-212ENST00000521951 SLC39A11Q8N1S5 342 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 TAF4BQ92750 862 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 ERGIC2Q96RQ1 377 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 VRTNQ9H8Y1 702 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 NUB1Q9Y5A7 615 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 PCDHB12Q9Y5F1 795 aa25.98■■□□□ 1.75
PVT1-212ENST00000521951 LAMA2P24043 3122 aaKnown RBP25.97■■□□□ 1.75
PVT1-212ENST00000521951 A0A1W2PPC1 479 aa25.97■■□□□ 1.75
PVT1-212ENST00000521951 CARNS1A5YM72 827 aa25.97■■□□□ 1.75
PVT1-212ENST00000521951 CBFA2T2O43439 604 aa25.97■■□□□ 1.75
PVT1-212ENST00000521951 TADA2AO75478 443 aa25.97■■□□□ 1.75
PVT1-212ENST00000521951 PON1P27169 355 aa25.97■■□□□ 1.75
PVT1-212ENST00000521951 PTPN21Q16825 1174 aa25.97■■□□□ 1.75
PVT1-212ENST00000521951 SV2CQ496J9 727 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms