RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
CTNNA1-228ENST00000521640 ZNF446Q9NWS9 450 aa7.23□□□□□ -1.25
CTNNA1-228ENST00000521640 PUF60Q9UHX1 559 aaKnown RBP7.23□□□□□ -1.25
CTNNA1-228ENST00000521640 DUSP10Q9Y6W6 482 aa7.23□□□□□ -1.25
CTNNA1-228ENST00000521640 ANKRD62A6NC57 917 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 GLTPD2A6NH11 291 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ZNF233A6NK53 670 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ASB14A6NK59 587 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 CCDC169A6NNP5 214 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 SHISA8B8ZZ34 492 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ADM5C9JUS6 153 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 TGFBR3LH3BV60 316 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 DDX3XO00571 662 aaKnown RBP eCLIP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ENC1O14682 589 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 HNRNPDLO14979 420 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 OIP5O43482 229 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 EXTL3O43909 919 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 MAFO75444 373 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 MTA2O94776 668 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 TRIM49P0CI25 452 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 TRIM49CP0CI26 452 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ADSSP30520 456 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 MFAP3P55082 362 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 PCBP4P57723 403 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 CCNA1P78396 465 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 CYP24A1Q07973 514 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 PPP3CAQ08209 521 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 GPS2Q13227 327 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 SNAPC2Q13487 334 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 LAMC2Q13753 1193 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 KCTD2Q14681 263 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 PSMD6Q15008 389 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 PPP2R5EQ16537 467 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 FAM26DQ5JW98 314 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 BEND6Q5SZJ8 279 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 CCDC181Q5TID7 509 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 IER5Q5VY09 327 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 C9orf131Q5VYM1 1079 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 GADL1Q6ZQY3 521 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 C15orf39Q6ZRI6 1047 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 HDXQ7Z353 690 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 KSR1Q8IVT5 923 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 FAM71AQ8IYT1 594 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 LRRC57Q8N9N7 239 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 FBXL13Q8NEE6 735 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 CAGE1Q8TC20 777 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 BSNDQ8WZ55 320 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 SHC3Q92529 594 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 FAXDC2Q96IV6 333 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 MMS19Q96T76 1030 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 SYT17Q9BSW7 474 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 UBXN6Q9BZV1 441 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 TMEM117Q9H0C3 514 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 POLR3FQ9H1D9 316 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ISCUQ9H1K1 167 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 C2orf40Q9H1Z8 148 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ELP3Q9H9T3 547 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 GPRC5CQ9NQ84 441 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 SUCLA2Q9P2R7 463 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 SALL4Q9UJQ4 1053 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 TTC7AQ9ULT0 858 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 ZSWIM8A7E2V4 1837 aa7.22□□□□□ -1.25
CTNNA1-228ENST00000521640 DOCK5Q9H7D0 1870 aa7.21□□□□□ -1.25
CTNNA1-228ENST00000521640 IGKV6-21A0A0C4DH24 114 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 GSTTP1A0A1W2PQM5 241 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 FAM181BA6NEQ2 426 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 CCDC188H7C350 402 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 ASAP2O43150 1006 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 PALMO75781 387 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 KIF4AO95239 1232 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 TBC1D8O95759 1140 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 ADRB2P07550 413 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 ARAFP10398 606 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 TNFAIP3P21580 790 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 GCLCP48506 637 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 LIG4P49917 911 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 STAT5BP51692 787 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 SP2Q02086 613 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 CNTN2Q02246 1040 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 APBA1Q02410 837 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 POU5F1BQ06416 359 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 MXD4Q14582 209 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 SURF1Q15526 300 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 LONRF2Q1L5Z9 754 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 CELF3Q5SZQ8 465 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 CDCA2Q69YH5 1023 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 PHLDB3Q6NSJ2 640 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 C11orf63Q6NUN7 778 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 SLC39A4Q6P5W5 647 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 CYFIP1Q7L576 1253 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 MAEAQ7L5Y9 396 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 RAB44Q7Z6P3 723 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 NCAPG2Q86XI2 1143 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 ZNF677Q86XU0 584 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 NOA1Q8NC60 698 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 SPATA4Q8NEY3 305 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 DEPTORQ8TB45 409 aa7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 LNX1Q8TBB1 728 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-228ENST00000521640 ACTRT1Q8TDG2 376 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms