RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 HES6Q96HZ4 224 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 DYDC2Q96IM9 177 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 SPAG5Q96R06 1193 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 CSRNP1Q96S65 589 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 MXRA8Q9BRK3 442 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TEKT3Q9BXF9 490 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 PACSIN1Q9BY11 444 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 GPR88Q9GZN0 384 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ISCUQ9H1K1 167 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 UNC45AQ9H3U1 944 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 SLITRK6Q9H5Y7 841 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TDRD3Q9H7E2 651 aaKnown RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 FAM204AQ9H8W3 233 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.47□□□□□ -1.53
SDC2-204ENST00000519914 OSGEPQ9NPF4 335 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 AGPAT3Q9NRZ7 376 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 DZANK1Q9NVP4 752 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 RGL1Q9NZL6 768 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TMOD2Q9NZR1 351 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 TBC1D7Q9P0N9 293 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 ZNF70Q9UC06 446 aaPredicted RBP5.47□□□□□ -1.53
SDC2-204ENST00000519914 ADAMTS1Q9UHI8 967 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 UBIAD1Q9Y5Z9 338 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 SIP14410 1827 aa5.47□□□□□ -1.53
SDC2-204ENST00000519914 COL4A5P29400 1685 aa5.46□□□□□ -1.53
SDC2-204ENST00000519914 DOCK1Q14185 1865 aa5.46□□□□□ -1.53
SDC2-204ENST00000519914 ATXN2Q99700 1313 aaKnown RBP5.46□□□□□ -1.53
SDC2-204ENST00000519914 ZNFX1Q9P2E3 1918 aaKnown RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 GOLGA6BA6NDN3 693 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 NFKBIEO00221 500 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 NCK2O43639 380 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 GAS7O60861 476 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 PPFIA4O75335 1185 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 MTA2O94776 668 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 GCNT3O95395 438 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 ICAM1P05362 532 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 GLI1P08151 1106 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 ACTN1P12814 892 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 PCSK2P16519 638 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 CAPN2P17655 700 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 MAP4P27816 1152 aaKnown RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 POLD1P28340 1107 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 ECHS1P30084 290 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 HOXA13P31271 388 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 ZNF76P36508 570 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 CAP2P40123 477 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 ECE1P42892 770 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 RBM5P52756 815 aaKnown RBP eCLIP5.46□□□□□ -1.54
SDC2-204ENST00000519914 ZKSCAN8Q15776 578 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 USH1GQ495M9 461 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 SGO2Q562F6 1265 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 ZNF772Q68DY9 489 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 XRRA1Q6P2D8 792 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 LRRC31Q6UY01 552 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 SND1Q7KZF4 910 aaKnown RBP eCLIP5.46□□□□□ -1.547e-11■■■□□ 17
SDC2-204ENST00000519914 HS2ST1Q7LGA3 356 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 NT5DC3Q86UY8 548 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 DTX1Q86Y01 620 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 EGFL6Q8IUX8 553 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 RTKN2Q8IZC4 609 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 DAW1Q8N136 415 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 RDM1Q8NG50 284 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 FAM76AQ8TAV0 307 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 LNX1Q8TBB1 728 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 ACER1Q8TDN7 264 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 MORC4Q8TE76 937 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 CASKIN2Q8WXE0 1202 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 CLEC4DQ8WXI8 215 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 RFFLQ8WZ73 363 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 LPAR1Q92633 364 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 TAF4BQ92750 862 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 SENP7Q9BQF6 1050 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.46□□□□□ -1.541e-15■□□□□ 8.5
SDC2-204ENST00000519914 PAGR1Q9BTK6 254 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 TMEM206Q9H813 350 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.46□□□□□ -1.54
SDC2-204ENST00000519914 DONSONQ9NYP3 566 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 GCNT4Q9P109 453 aa5.46□□□□□ -1.54
SDC2-204ENST00000519914 WRAP73Q9P2S5 460 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 AJAP1Q9UKB5 411 aaPredicted RBP5.46□□□□□ -1.54
SDC2-204ENST00000519914 PHIPQ8WWQ0 1821 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 KIAA1217Q5T5P2 1943 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 ANKRD62A6NC57 917 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GOLGA6CA6NDK9 693 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 ERICH4A6NGS2 130 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 H0YGN5 161 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 PGRMC1O00264 195 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 SOX1O00570 391 aaPredicted RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 WDR46O15213 610 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 PPIP5K2O43314 1243 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 RAD51CO43502 376 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 HSF2BPO75031 334 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 HEXIM1O94992 359 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 FTCDO95954 541 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 P4HBP07237 508 aaKnown RBP5.45□□□□□ -1.54
SDC2-204ENST00000519914 ASNSP08243 561 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 GOLGA6DP0CG33 693 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 ARP10275 920 aa5.45□□□□□ -1.54
SDC2-204ENST00000519914 HSPA6P17066 643 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms