RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 NIF3L1Q9GZT8 377 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 RPF1Q9H9Y2 349 aaKnown RBP9□□□□□ -0.97
HMGB4-203ENST00000519684 GBA2Q9HCG7 927 aaPredicted RBP9□□□□□ -0.97
HMGB4-203ENST00000519684 MRPL47Q9HD33 250 aaKnown RBP9□□□□□ -0.97
HMGB4-203ENST00000519684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9□□□□□ -0.97
HMGB4-203ENST00000519684 CNTN6Q9UQ52 1028 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 AKT3Q9Y243 479 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 TNFSF13BQ9Y275 285 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 PCDHA3Q9Y5H8 950 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 SCINQ9Y6U3 715 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 UMODL1Q5DID0 1318 aa9□□□□□ -0.97
HMGB4-203ENST00000519684 FAM187AA6NFU0 413 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 MYO1FO00160 1098 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ABLIM1O14639 778 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 PHF2O75151 1096 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 GJB1P08034 283 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 FAM153BP0C7A2 387 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 SLC1A1P43005 524 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 MARCKSL1P49006 195 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 MYL6P60660 151 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 POU5F1BQ06416 359 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF699Q32M78 642 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 FAM153CQ494X1 144 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 GJC2Q5T442 439 aaPredicted RBP8.99□□□□□ -0.97
HMGB4-203ENST00000519684 PASD1Q8IV76 773 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 TSEN2Q8NCE0 465 aaKnown RBP8.99□□□□□ -0.97
HMGB4-203ENST00000519684 AFG1LQ8WV93 481 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 BRI3BPQ8WY22 251 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 CD101Q93033 1021 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
HMGB4-203ENST00000519684 LRRC45Q96CN5 670 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 CYFIP2Q96F07 1278 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 RUNDC3BQ96NL0 473 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 SCLT1Q96NL6 688 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 FAM204AQ9H8W3 233 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 PSD3Q9NYI0 1048 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ADAM22Q9P0K1 906 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.99□□□□□ -0.97
HMGB4-203ENST00000519684 FAM153AQ9UHL3 310 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.99□□□□□ -0.97
HMGB4-203ENST00000519684 B4GALT5O43286 388 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ZEB2O60315 1214 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ERLIN2O94905 339 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF286BP0CG31 522 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 CD58P19256 250 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 RRM1P23921 792 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 CHRNA3P32297 505 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 CYP2C19P33261 490 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 ADCYAP1R1P41586 468 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 LMAN1P49257 510 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 PEX5P50542 639 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 OSTNP61366 133 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 NOMO3P69849 1222 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 PPFIA1Q13136 1202 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 MON1BQ7L1V2 547 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 GPR142Q7Z601 462 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 VCPIP1Q96JH7 1222 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 C11orf70Q9BRQ4 267 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 CDT1Q9H211 546 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 PTPRHQ9HD43 1115 aa8.99□□□□□ -0.97
HMGB4-203ENST00000519684 GOLGA6CA6NDK9 693 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 AGPSO00116 658 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 DAPK3O43293 454 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 B4GALT4O60513 344 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 CST3P01034 146 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 HOXC6P09630 235 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 GOLGA6DP0CG33 693 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MCF2P10911 925 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 C1QBPQ07021 282 aaKnown RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 KYAT1Q16773 422 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 FAM187BQ17R55 369 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 EEF1DP3Q658K8 133 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 SMYD5Q6GMV2 418 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 AADACL2Q6P093 401 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PLEKHH3Q7Z736 793 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PHF13Q86YI8 300 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 OR6J1Q8NGC5 347 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MAIP1Q8WWC4 291 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 RIN2Q8WYP3 895 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MAGOHBQ96A72 148 aaKnown RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 ZBTB10Q96DT7 871 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 CELF4Q9BZC1 486 aaKnown RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 DPH5Q9H2P9 285 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 SLC5A4Q9NY91 659 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 GOLGA6AQ9NYA3 693 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 CEP83Q9Y592 693 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MROH7Q68CQ1 1323 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 ANK1P16157 1881 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 A0A087WZ62 844 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PPFIA4O75335 1185 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 LSM8O95777 96 aaKnown RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 KRT19P08727 400 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 PYGMP11217 842 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 GBP1P32455 592 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 SSTR3P32745 418 aaPredicted RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 HSPA9P38646 679 aaKnown RBP8.98□□□□□ -0.97
HMGB4-203ENST00000519684 ZNF132P52740 706 aa8.98□□□□□ -0.97
HMGB4-203ENST00000519684 MTMR3Q13615 1198 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms