RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 VARS2Q5ST30 1063 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 L1TD1Q5T7N2 865 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 ADALQ6DHV7 355 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 JADE1Q6IE81 842 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 SLC8B1Q6J4K2 584 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 ELMSAN1Q6PJG2 1045 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 CCDC149Q6ZUS6 474 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 CD302Q8IX05 232 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 ZNF461Q8TAF7 563 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 PBXIP1Q96AQ6 731 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 ACSF2Q96CM8 615 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 HVCN1Q96D96 273 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 ACCSQ96QU6 501 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 MYADMQ96S97 322 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 SMOC2Q9H3U7 446 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 PIDD1Q9HB75 910 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 OLFML3Q9NRN5 406 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 AGO2Q9UKV8 859 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 UBQLN1Q9UMX0 589 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 SORCS3Q9UPU3 1222 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 ARIH1Q9Y4X5 557 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 NUB1Q9Y5A7 615 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 PCDHB13Q9Y5F0 798 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 DOCK6Q96HP0 2047 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 TECTAO75443 2155 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 ANO9A1A5B4 782 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 H7C4K7 107 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 M0QZQ0 153 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 PIRO00625 290 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 PPEF2O14830 753 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 POLR2DO15514 142 aaKnown RBP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 GCNT3O95395 438 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 SEC24AO95486 1093 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 C8AP07357 584 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 HNRNPA1P09651 372 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 HOXD13P35453 343 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 AARSP49588 968 aaKnown RBP eCLIP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 NTHL1P78549 312 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 PPP2R3AQ06190 1150 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 PPM1LQ5SGD2 360 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 SCARA3Q6AZY7 606 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 CNNM4Q6P4Q7 775 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 POTEHQ6S545 545 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 RTL10Q7L3V2 364 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 GRASPQ7Z6J2 395 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 IQUBQ8NA54 791 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 TDRD5Q8NAT2 981 aaKnown RBP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 GLIS3Q8NEA6 775 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 RSAD2Q8WXG1 361 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 HPS3Q969F9 1004 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 DHX58Q96C10 678 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 BORCS6Q96GS4 357 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 CHAMP1Q96JM3 812 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 C7orf25Q9BPX7 421 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 TRIM9Q9C026 710 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 CUEDC2Q9H467 287 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 ASB7Q9H672 318 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 DNMT3BQ9UBC3 853 aaKnown RBP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 FBXL5Q9UKA1 691 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 CFAP45Q9UL16 551 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 PCDHB8Q9UN66 801 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 TIMM13Q9Y5L4 95 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-215ENST00000519474 CITO14578 2027 aa10.15□□□□□ -0.78
HDAC3-215ENST00000519474 CLUHO75153 1309 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 C2orf16Q68DN1 1984 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 WDR27A2RRH5 827 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 SPTLC1O15269 473 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 CCL16O15467 120 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 OAZ2O95190 189 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 NFICP08651 508 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 LAMP2P13473 410 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 ATF2P15336 505 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 CASP1P29466 404 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 HOXA9P31269 272 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 GBP2P32456 591 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-215ENST00000519474 MCM4P33991 863 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 ARPP19P56211 112 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 WNT7BP56706 349 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 LILRA4P59901 499 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 AMPD3Q01432 767 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 ROR1Q01973 937 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 CTXN3Q4LDR2 81 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 C9orf57Q5W0N0 161 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 RESP18Q5W5W9 173 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 UBALD2Q8IYN6 164 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 SLC44A3Q8N4M1 653 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 BEST2Q8NFU1 509 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 SLC7A14Q8TBB6 771 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 ZNF507Q8TCN5 953 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 KCNG4Q8TDN1 519 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 POMGNT1Q8WZA1 660 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 MFSD14AQ96MC6 490 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 LRRC27Q9C0I9 530 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 TNMDQ9H2S6 317 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 HCFC1R1Q9NWW0 138 aa10.14□□□□□ -0.79
HDAC3-215ENST00000519474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC3-215ENST00000519474 EPS15L1Q9UBC2 864 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms