RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 TMEM60Q9H2L4 133 aa20.8■□□□□ 0.92
CTNNA1-213ENST00000519113 MAFFQ9ULX9 164 aa20.8■□□□□ 0.92
CTNNA1-213ENST00000519113 TNFSF13BQ9Y275 285 aa20.8■□□□□ 0.92
CTNNA1-213ENST00000519113 K7ERI5 159 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 PODXLO00592 558 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 ZNF263O14978 683 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 GRM5P41594 1212 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 XKR4Q5GH76 650 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 VITQ6UXI7 678 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 NUB1Q9Y5A7 615 aa20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.79■□□□□ 0.92
CTNNA1-213ENST00000519113 SEC24AO95486 1093 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 MUTP22033 750 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 RPL9P32969 192 aaKnown RBP20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 MCM7P33993 719 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 CCR2P41597 374 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 MLLT6P55198 1093 aaPredicted RBP20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 SOX4Q06945 474 aaPredicted RBP20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 SIM2Q14190 667 aaPredicted RBP20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 MRPL58Q14197 206 aaKnown RBP20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 ST3GAL2Q16842 350 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 PPM1JQ5JR12 505 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 C1orf228Q6PIY5 440 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 ALKAL1Q6UXT8 129 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 MFSD6LQ8IWD5 586 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 E2F7Q96AV8 911 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 MSANTD3Q96H12 275 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 ZSWIM3Q96MP5 696 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 TRPV4Q9HBA0 871 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 FBXL5Q9UKA1 691 aa20.78■□□□□ 0.92
CTNNA1-213ENST00000519113 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 FOXD2O60548 495 aaPredicted RBP20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 CHRNB1P11230 501 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 CNR2P34972 360 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 CTXN3Q4LDR2 81 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 SPEM1Q8N4L4 309 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 GPR88Q9GZN0 384 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 ASAH2Q9NR71 780 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 SEMA4GQ9NTN9 838 aa20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 AFF4Q9UHB7 1163 aaKnown RBP20.77■□□□□ 0.92
CTNNA1-213ENST00000519113 NRG2O14511 850 aaPredicted RBP20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 KCNE1P15382 129 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 CCNE1P24864 410 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 VIPR2P41587 438 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 OSTNP61366 133 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 SATB1Q01826 763 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 TWF1Q12792 350 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 LRRC32Q14392 662 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 CSRP2Q16527 193 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 HAUS3Q68CZ6 603 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 ZNF280DQ6N043 979 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 HS6ST3Q8IZP7 471 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 NECAB1Q8N987 351 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 APPL2Q8NEU8 664 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 ZSCAN18Q8TBC5 510 aaPredicted RBP20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 CSGALNACT1Q8TDX6 532 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 TMX3Q96JJ7 454 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 ACAP3Q96P50 834 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 ACO2Q99798 780 aaKnown RBP20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 CDT1Q9H211 546 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 CHD8Q9HCK8 2581 aa20.76■□□□□ 0.91
CTNNA1-213ENST00000519113 MYL4P12829 197 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 EPHA5P54756 1037 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 ZNF568Q3ZCX4 644 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 PRR23CQ6ZRP0 262 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 YAF2Q8IY57 180 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 CEP120Q8N960 986 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 DDX1Q92499 740 aaKnown RBP20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 GTF3C6Q969F1 213 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 CHAMP1Q96JM3 812 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 ZMAT2Q96NC0 199 aaKnown RBP20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 MRPL4Q9BYD3 311 aaKnown RBP20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 SLITRK6Q9H5Y7 841 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 C8orf33Q9H7E9 229 aaPredicted RBP20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 POLD4Q9HCU8 107 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 PTPRHQ9HD43 1115 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 CHMP5Q9NZZ3 219 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 CEP72Q9P209 647 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 LIMCH1Q9UPQ0 1083 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 PHLPP2Q6ZVD8 1323 aa20.75■□□□□ 0.91
CTNNA1-213ENST00000519113 CCDC169A6NNP5 214 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 HEPACAM2A8MVW5 462 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 HRO43593 1189 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 MOSPD3O75425 235 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 OR52Z1P0C646 297 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 FOSBP53539 338 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 PTGDRQ13258 359 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 ORC2Q13416 577 aaPredicted RBP20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 SAFBQ15424 915 aaKnown RBP eCLIP20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 LONP2Q86WA8 852 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 SUSD3Q96L08 255 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 ZSCAN31Q96LW9 406 aaPredicted RBP20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 TCHPQ9BT92 498 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 BHMT2Q9H2M3 363 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 TMEM134Q9H6X4 195 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 FOXD4L1Q9NU39 408 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 ZFHX4Q86UP3 3567 aa20.74■□□□□ 0.91
CTNNA1-213ENST00000519113 CHURC1-FNTBB4DL54 471 aa20.73■□□□□ 0.91
CTNNA1-213ENST00000519113 ARNTLO00327 626 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms