RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 E2F7Q96AV8 911 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 FRYQ5TBA9 3013 aa13.57□□□□□ -0.24
TRAPPC9-204ENST00000518723 CYP11B2P19099 503 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 VIPR2P41587 438 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 SOX4Q06945 474 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 SRSF5Q13243 272 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 PPP2R5AQ15172 486 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 ALKAL1Q6UXT8 129 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 CATSPER3Q86XQ3 398 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZSCAN18Q8TBC5 510 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 WASF1Q92558 559 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 NACC1Q96RE7 527 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 GPR88Q9GZN0 384 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 SLC38A7Q9NVC3 462 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 CEP72Q9P209 647 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 AFF4Q9UHB7 1163 aaKnown RBP13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 FBXL5Q9UKA1 691 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 NCANO14594 1321 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 BAHCC1Q9P281 2608 aa13.56□□□□□ -0.24
TRAPPC9-204ENST00000518723 HEPACAM2A8MVW5 462 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 PODXLO00592 558 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 TM4SF5O14894 197 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 MED24O75448 989 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 LIG1P18858 919 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 GRM5P41594 1212 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 ARPP19P56211 112 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 DGKKQ5KSL6 1271 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 NT5DC1Q5TFE4 455 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 IL31Q6EBC2 164 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 PADI6Q6TGC4 694 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 WDR5BQ86VZ2 330 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 HS6ST3Q8IZP7 471 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 FAM160A2Q8N612 972 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZNF512Q96ME7 567 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 POLR3CQ9BUI4 534 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 ASAH2Q9NR71 780 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 ORC3Q9UBD5 711 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZZEF1O43149 2961 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 MYBPHLA2RUH7 354 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 ARHGEF35A5YM69 484 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 WNT7AO00755 349 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 CHADO15335 359 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 PFKFB2O60825 505 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 CTDNEP1O95476 244 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 RPL9P32969 192 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 YARSP54577 528 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 FCHO2Q0JRZ9 810 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 TWF1Q12792 350 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 CTXN3Q4LDR2 81 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 WDR44Q5JSH3 913 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 N4BP2L1Q5TBK1 243 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 Q6ZS52 159 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 CSGALNACT1Q8TDX6 532 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 LOXL4Q96JB6 756 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 SUSD3Q96L08 255 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 KIFC3Q9BVG8 833 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 TNFSF13BQ9Y275 285 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
TRAPPC9-204ENST00000518723 MYL4P12829 197 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 KCNE1P15382 129 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 GJA1P17302 382 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 RPA1P27694 616 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 KPNA1P52294 538 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 TEAD2Q15562 447 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 AASDHQ4L235 1098 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 HEATR6Q6AI08 1181 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZNF280DQ6N043 979 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 CEP68Q76N32 757 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 RALGPS2Q86X27 583 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 YAF2Q8IY57 180 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 CEP120Q8N960 986 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 KIFAP3Q92845 792 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 RSPRY1Q96DX4 576 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 IFT74Q96LB3 600 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZMAT2Q96NC0 199 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 CDT1Q9H211 546 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 TMEM60Q9H2L4 133 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 NUB1Q9Y5A7 615 aa13.53□□□□□ -0.24
TRAPPC9-204ENST00000518723 ZFYVE26Q68DK2 2539 aa13.52□□□□□ -0.24
TRAPPC9-204ENST00000518723 SLC38A8A6NNN8 435 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 SPECC1L-ADORA2AF8WAN1 911 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 ZNF806P0C7X5 589 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 MUTP22033 750 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 KCNA4P22459 653 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 CTHP32929 405 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 CCINQ13939 588 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 TXNDC11Q6PKC3 985 aa13.52□□□□□ -0.25
TRAPPC9-204ENST00000518723 APPL2Q8NEU8 664 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms