RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ROPN1Q9HAT0 212 aaPredicted RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 KLHL11Q9NVR0 708 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC12A6Q9UHW9 1150 aa11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 IPO11Q9UI26 975 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.45□□□□□ -0.58
PCDHGA1-202ENST00000517417 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DCDC2CA8MYV0 355 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 WDR46O15213 610 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC26A4O43511 780 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 FDX1P10109 184 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 TBXAS1P24557 533 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 CIITAP33076 1130 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 GPS1Q13098 491 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 FAM102AQ5T9C2 384 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZNF280CQ8ND82 737 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZNF384Q8TF68 577 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATP6V1E2Q96A05 226 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 CREB3O43889 395 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DGAT1O75907 488 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 THOC5Q13769 683 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 JADE1Q6IE81 842 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 IRF2BP2Q7Z5L9 587 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 C1orf131Q8NDD1 294 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ARMC2Q8NEN0 867 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 CPA5Q8WXQ8 436 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 MAML1Q92585 1016 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 TRAF3IP3Q9Y228 551 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 FOXN3O00409 490 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 PFDN6O15212 129 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATP5HO75947 161 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 GYS1P13807 737 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ARL4CP56559 192 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 CAV1Q03135 178 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC12A1Q13621 1099 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 SNRNP35Q16560 246 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ZC3H18Q86VM9 953 aaKnown RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 TEX2Q8IWB9 1127 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 LPAR1Q92633 364 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 HAS1Q92839 578 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC35C1Q96A29 364 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 KCNH7Q9NS40 1196 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ASNSD1Q9NWL6 643 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 KLHL8Q9P2G9 620 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 GLI3P10071 1580 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 A0A0G2JND7 137 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DNM1LO00429 736 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 PPFIA2O75334 1257 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 PAX7P23759 505 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ADORA2BP29275 332 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 BIRC2Q13490 618 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DBN1Q16643 649 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ARL13BQ3SXY8 428 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 XKR3Q5GH77 459 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 SYCP2LQ5T4T6 812 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 SLC13A5Q86YT5 568 aaPredicted RBP11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 BTBD6Q96KE9 485 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 C9orf72Q96LT7 481 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 GBP5Q96PP8 586 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 OSBPL7Q9BZF2 842 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 GGA3Q9NZ52 723 aa11.44□□□□□ -0.58
PCDHGA1-202ENST00000517417 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 A8MXQ7 604 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 TBX3O15119 743 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 RARGP13631 454 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 RPL21P46778 160 aaKnown RBP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 ARHGEF26Q96DR7 871 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 PGM2Q96G03 612 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 NUDCD1Q96RS6 583 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 KLC2Q9H0B6 622 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 C2orf40Q9H1Z8 148 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 ABCF3Q9NUQ8 709 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 BCAP29Q9UHQ4 241 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 MCM8Q9UJA3 840 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 SKAP2O75563 359 aaPredicted RBP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 PRKCIP41743 596 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 RPS6P62753 249 aaKnown RBP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 TNFAIP2Q03169 654 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 IZUMO3Q5VZ72 239 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 GRAMD1AQ96CP6 724 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 OSBPL1AQ9BXW6 950 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 STRIP2Q9ULQ0 834 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 ABCA3Q99758 1704 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 EIF3DO15371 548 aaKnown RBP eCLIP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 KRT37O76014 449 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 DPEP1P16444 411 aa11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 NCF2P19878 526 aaPredicted RBP11.43□□□□□ -0.58
PCDHGA1-202ENST00000517417 BCAR1P56945 870 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms