RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	SAR1B	Q9Y6B6	198 aa		12.82	□□□□□ -0.36
LMNA-224	ENST00000515711	CAPN6	Q9Y6Q1	641 aa		12.82	□□□□□ -0.36
LMNA-224	ENST00000515711	EFCAB8	A8MWE9	144 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	CYP26A1	O43174	497 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	TREH	O43280	583 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	ADAMTS4	O75173	837 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	RTN2	O75298	545 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	CABYR	O75952	493 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	P4HA1	P13674	534 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	PRKAR2A	P13861	404 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	TCP1	P17987	556 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	ATIC	P31939	592 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	YARS	P54577	528 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	SNX17	Q15036	470 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	ZNF699	Q32M78	642 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	MAP3K21	Q5TCX8	1036 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	RPAIN	Q86UA6	219 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	EFCAB13	Q8IY85	973 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	SYCE1	Q8N0S2	351 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	OLIG1	Q8TAK6	271 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	DNAJB3	Q8WWF6	145 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	TRIM11	Q96F44	468 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	RPGRIP1	Q96KN7	1286 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	OSMR	Q99650	979 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	ISCU	Q9H1K1	167 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	ITGA11	Q9UKX5	1188 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	HYOU1	Q9Y4L1	999 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	TRPV2	Q9Y5S1	764 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	DUSP10	Q9Y6W6	482 aa		12.81	□□□□□ -0.36
LMNA-224	ENST00000515711	MYADML2	A6NDP7	307 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	SGPL1	O95470	568 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	STAU1	O95793	577 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	GALC	P54803	685 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	HADHB	P55084	474 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	OSTN	P61366	133 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	PTPN11	Q06124	597 aa	Predicted RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	TMEM132D	Q14C87	1099 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	TCEAL1	Q15170	157 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	NOP9	Q86U38	636 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	TTC39C	Q8N584	583 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	CEP120	Q8N960	986 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	SLAIN1	Q8ND83	568 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	KLHDC9	Q8NEP7	349 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	RAET1E	Q8TD07	263 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	SLC20A1	Q8WUM9	679 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	CARD6	Q9BX69	1037 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	PACSIN1	Q9BY11	444 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	TRIM6	Q9C030	488 aa	Predicted RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	VRTN	Q9H8Y1	702 aa		12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	APOBEC3G	Q9HC16	384 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	DDX20	Q9UHI6	824 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-224	ENST00000515711	LACTBL1	A8MY62	500 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	XPOT	O43592	962 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	BUB1	O43683	1085 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	TADA3	O75528	432 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	CSDE1	O75534	798 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	NPTXR	O95502	500 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	PGK1	P00558	417 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	ATP1A1	P05023	1023 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	NFIC	P08651	508 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	ACO1	P21399	889 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	MYL6	P60660	151 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	IRX5	P78411	483 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	MRPS6	P82932	125 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	FMO1	Q01740	532 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	HIC1	Q14526	733 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	NBPF20	Q3BBV1	942 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	ZNF667	Q5HYK9	610 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	JADE1	Q6IE81	842 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	RNF180	Q86T96	592 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	SLC47A2	Q86VL8	602 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	CDR2L	Q86X02	465 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	UBR7	Q8N806	425 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	GOLGA1	Q92805	767 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	SNX27	Q96L92	541 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	CELF4	Q9BZC1	486 aa	Known RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.79	□□□□□ -0.36	4e-8	■■■■□ 24.3
LMNA-224	ENST00000515711	SALL4	Q9UJQ4	1053 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	SNX12	Q9UMY4	172 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	GINS2	Q9Y248	185 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	NUB1	Q9Y5A7	615 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	PCDHB4	Q9Y5E5	795 aa		12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-224	ENST00000515711	CTAGE15	A4D2H0	777 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	GRID2IP	A4D2P6	1211 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	CES2	O00748	559 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	CAND2	O75155	1236 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	PALM	O75781	387 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	MME	P08473	750 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	CTAGE8	P0CG41	777 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	MYBL1	P10243	752 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	ELN	P15502	786 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	CHRNB2	P17787	502 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	CCND3	P30281	292 aa	Predicted RBP	12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	GNA15	P30679	374 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	HOXA11	P31270	313 aa	Predicted RBP	12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	NOP2	P46087	812 aa	Known RBP	12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	TMEM62	Q0P6H9	643 aa		12.78	□□□□□ -0.36
LMNA-224	ENST00000515711	SLC10A6	Q3KNW5	377 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms