RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TRPC3Q13507 836 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 EPC2Q52LR7 807 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 FKBP15Q5T1M5 1219 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 DCLRE1AQ6PJP8 1040 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 SARM1Q6SZW1 724 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 PAAF1Q9BRP4 392 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
LSM6-207ENST00000515311 AGAP1Q9UPQ3 857 aa22.61■■□□□ 1.21
LSM6-207ENST00000515311 R3HCC1Q9Y3T6 440 aaKnown RBP22.61■■□□□ 1.21
LSM6-207ENST00000515311 LAMA2P24043 3122 aaKnown RBP22.61■■□□□ 1.21
LSM6-207ENST00000515311 LCHNA4D1U4 455 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 STAU1O95793 577 aaKnown RBP22.6■■□□□ 1.21
LSM6-207ENST00000515311 GALTP07902 379 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 KRT19P08727 400 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 ATICP31939 592 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 OR1G1P47890 313 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 SLC11A1P49279 550 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 ALDH7A1P49419 539 aaKnown RBP22.6■■□□□ 1.21
LSM6-207ENST00000515311 RAB30Q15771 203 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 TMEM130Q8N3G9 435 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 TAF4BQ92750 862 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 ZNF560Q96MR9 790 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 ZNF558Q96NG5 402 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 AAASQ9NRG9 546 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 RAB20Q9NX57 234 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 CACNG4Q9UBN1 327 aa22.6■■□□□ 1.21
LSM6-207ENST00000515311 NRP1O14786 923 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 ASS1P00966 412 aaKnown RBP22.59■■□□□ 1.21
LSM6-207ENST00000515311 CST3P01034 146 aaPredicted RBP22.59■■□□□ 1.21
LSM6-207ENST00000515311 LINC00271P0C7V0 271 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 UBASH3AP57075 661 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 MYO1EQ12965 1108 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 SGSM1Q2NKQ1 1148 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 SPOUT1Q5T280 376 aaKnown RBP22.59■■□□□ 1.21
LSM6-207ENST00000515311 KCNT2Q6UVM3 1135 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 GBP6Q6ZN66 633 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 COLGALT1Q8NBJ5 622 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 HPDLQ96IR7 371 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 NAP1L5Q96NT1 182 aaPredicted RBP22.59■■□□□ 1.21
LSM6-207ENST00000515311 COLEC11Q9BWP8 271 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 IMPG2Q9BZV3 1241 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 XYLT2Q9H1B5 865 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 VRTNQ9H8Y1 702 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 GCNT4Q9P109 453 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 FAN1Q9Y2M0 1017 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 RWDD3Q9Y3V2 267 aa22.59■■□□□ 1.21
LSM6-207ENST00000515311 LINC01553A4QN01 128 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 PPEF2O14830 753 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 B3GAT3O94766 335 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 KIF4AO95239 1232 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 TPM3P06753 285 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 TAF6P49848 677 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 MYL6P60660 151 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 SMAD3P84022 425 aaKnown RBP22.58■■□□□ 1.21
LSM6-207ENST00000515311 UBXN1Q04323 297 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 NR1I3Q14994 352 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 EXOC3L4Q17RC7 722 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 SV2CQ496J9 727 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 PRPF38BQ5VTL8 546 aaKnown RBP22.58■■□□□ 1.21
LSM6-207ENST00000515311 SCARA3Q6AZY7 606 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 CCDC150Q8NCX0 1101 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 C3orf58Q8NDZ4 430 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 SEMA4DQ92854 862 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 IFNKQ9P0W0 207 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 MSRAQ9UJ68 235 aa22.58■■□□□ 1.21
LSM6-207ENST00000515311 FSD2A1L4K1 749 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 CBFA2T2O43439 604 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 CA3P07451 260 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 MYOGP15173 224 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 PPM1AP35813 382 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 AARSP49588 968 aaKnown RBP eCLIP22.57■■□□□ 1.2
LSM6-207ENST00000515311 LILRA4P59901 499 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 EHBP1Q8NDI1 1231 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 LMO3Q8TAP4 145 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 RABGGTAQ92696 567 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 ERGIC2Q96RQ1 377 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 PBX4Q9BYU1 374 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 INTS2Q9H0H0 1204 aaKnown RBP22.57■■□□□ 1.2
LSM6-207ENST00000515311 MARCH5Q9NX47 278 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 YBX2Q9Y2T7 364 aaKnown RBP22.57■■□□□ 1.2
LSM6-207ENST00000515311 PRG3Q9Y2Y8 225 aaPredicted RBP22.57■■□□□ 1.2
LSM6-207ENST00000515311 PCDHB12Q9Y5F1 795 aa22.57■■□□□ 1.2
LSM6-207ENST00000515311 GOLGA6L3A6NEY3 463 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 PBX2P40425 430 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 ZNF699Q32M78 642 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 WDR44Q5JSH3 913 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 CD300LGQ6UXG3 332 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 SLC39A11Q8N1S5 342 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 FAXDC2Q96IV6 333 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 SAMD11Q96NU1 681 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 CRACR2AQ9BSW2 395 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 XPO4Q9C0E2 1151 aaKnown RBP22.56■■□□□ 1.2
LSM6-207ENST00000515311 GDAP2Q9NXN4 497 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 SPG21Q9NZD8 308 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 ADAM28Q9UKQ2 775 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 NUB1Q9Y5A7 615 aa22.56■■□□□ 1.2
LSM6-207ENST00000515311 A0A1W2PQC6 194 aa22.55■■□□□ 1.2
LSM6-207ENST00000515311 KPNA7A9QM74 516 aa22.55■■□□□ 1.2
LSM6-207ENST00000515311 ITGB1P05556 798 aa22.55■■□□□ 1.2
LSM6-207ENST00000515311 PON1P27169 355 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms