RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 GPR87Q9BY21 358 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 CLCA2Q9UQC9 943 aa6.47□□□□□ -1.37
HMGCS1-207ENST00000514610 K7ESM1 405 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 GOLIM4O00461 696 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 PHGDHO43175 533 aaKnown RBP6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 GJB1P08034 283 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 KITP10721 976 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 HIBADHP31937 336 aaKnown RBP6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 CACNB3P54284 484 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 CTSWP56202 376 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 PLP2Q04941 152 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 KIF22Q14807 665 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 SAFBQ15424 915 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 KHDC1LQ5JSQ8 128 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 UTP14CQ5TAP6 766 aaKnown RBP6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 PPP4R4Q6NUP7 873 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 GSPT2Q8IYD1 628 aaKnown RBP6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 TMIEQ8NEW7 156 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 NLGN4YQ8NFZ3 816 aaPredicted RBP6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 ANKS1AQ92625 1134 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 PHACTR3Q96KR7 559 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 ADOQ96SZ5 270 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 USP19O94966 1318 aa6.46□□□□□ -1.38
HMGCS1-207ENST00000514610 A0A1W2PPL8 197 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 CCDC78A2IDD5 438 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 GRXCR1A8MXD5 290 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 MYO1FO00160 1098 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 AGFG2O95081 481 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 APOBEC3AP31941 199 aaPredicted RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 MAN2A2P49641 1150 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 SELENOPP49908 381 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 SOX8P57073 446 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 PSMC1P62191 440 aaKnown RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 NOMO3P69849 1222 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 NHLH2Q02577 135 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 SLFN5Q08AF3 891 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 RRP1BQ14684 758 aaKnown RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 R3HDM1Q15032 1099 aaKnown RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 NOMO2Q5JPE7 1267 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 FAM102AQ5T9C2 384 aaPredicted RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 EMC10Q5UCC4 262 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 IL31Q6EBC2 164 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 TBC1D15Q8TC07 691 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 SLC39A13Q96H72 371 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 C8orf49Q96NF6 230 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 KLHL32Q96NJ5 620 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 P2RX7Q99572 595 aaKnown RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 BRD9Q9H8M2 597 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 RSAD1Q9HA92 442 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 SARS2Q9NP81 518 aaKnown RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 GNL3LQ9NVN8 582 aaKnown RBP6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 ZDHHC8Q9ULC8 765 aa6.45□□□□□ -1.38
HMGCS1-207ENST00000514610 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 ANO9A1A5B4 782 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 E9PLN8 166 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 FRS3O43559 492 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 PQBP1O60828 265 aaKnown RBP6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 GNAI3P08754 354 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 PHKG2P15735 406 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 MGAT1P26572 445 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 NEK3P51956 506 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 ARFIP2P53365 341 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 GNAI1P63096 354 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 HS1BP3Q53T59 392 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 SYCP2LQ5T4T6 812 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 FITM2Q8N6M3 262 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 TTC9BQ8N6N2 239 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 VKORC1Q9BQB6 163 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 NAA15Q9BXJ9 866 aaKnown RBP6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 TLR10Q9BXR5 811 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 TEX101Q9BY14 249 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 DEF6Q9H4E7 631 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 CFAP97Q9P2B7 532 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 AGAP1Q9UPQ3 857 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 XDHP47989 1333 aa6.44□□□□□ -1.38
HMGCS1-207ENST00000514610 ZNF785A8K8V0 405 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 GOLGA6L6A8MZA4 724 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 TBX3O15119 743 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 ZNF185O15231 689 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 CYP27B1O15528 508 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 FOXD2O60548 495 aaPredicted RBP6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 RARBP10826 455 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 FCER1AP12319 257 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 MYF5P13349 255 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 GCSHP23434 173 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 SLC7A1P30825 629 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 RNASE9P60153 205 aaKnown RBP6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 UBE4AQ14139 1066 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 POLD3Q15054 466 aaPredicted RBP6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 CDSNQ15517 529 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 CRB2Q5IJ48 1285 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 AGAP9Q5VTM2 703 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 PDSS2Q86YH6 399 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 APIPQ96GX9 242 aa6.43□□□□□ -1.38
HMGCS1-207ENST00000514610 TRIM54Q9BYV2 358 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms