RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ZFYVE19Q96K21 471 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 MKNK1Q9BUB5 465 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 DUSP15Q9H1R2 295 aaPredicted RBP12.36□□□□□ -0.43
RNF4-218ENST00000513284 CYP4F11Q9HBI6 524 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 GOLGA2P5Q9HBQ8 144 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 NCOA5Q9HCD5 579 aaKnown RBP12.36□□□□□ -0.43
RNF4-218ENST00000513284 GPRC5CQ9NQ84 441 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 VPS45Q9NRW7 570 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 GTSE1Q9NYZ3 720 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 ARID2Q68CP9 1835 aa12.36□□□□□ -0.43
RNF4-218ENST00000513284 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
RNF4-218ENST00000513284 CCDC163A0A0D9SF12 145 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 TMEM8BA6NDV4 472 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 CAPNS1P04632 268 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 HMGB1P09429 215 aaKnown RBP12.35□□□□□ -0.43
RNF4-218ENST00000513284 MYL4P12829 197 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 ELF1P32519 619 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 ARPP19P56211 112 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 FGD1P98174 961 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
RNF4-218ENST00000513284 SOX4Q06945 474 aaPredicted RBP12.35□□□□□ -0.43
RNF4-218ENST00000513284 FAM187BQ17R55 369 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 PLK5Q496M5 336 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 GLRA4Q5JXX5 417 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 CYP4A22Q5TCH4 519 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 SH3PXD2AQ5TCZ1 1133 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 RALGPS2Q86X27 583 aaPredicted RBP12.35□□□□□ -0.43
RNF4-218ENST00000513284 CSGALNACT1Q8TDX6 532 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 MSANTD3Q96H12 275 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 HSD17B14Q9BPX1 270 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 C22orf23Q9BZE7 217 aa12.35□□□□□ -0.43
RNF4-218ENST00000513284 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
RNF4-218ENST00000513284 DCLK1O15075 740 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 LYPLA2O95372 231 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
RNF4-218ENST00000513284 VNN2O95498 520 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 CACNB1Q02641 598 aaPredicted RBP12.34□□□□□ -0.43
RNF4-218ENST00000513284 SOWAHCQ53LP3 525 aaPredicted RBP12.34□□□□□ -0.43
RNF4-218ENST00000513284 STXBP5Q5T5C0 1151 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 PPP4R3AQ6IN85 833 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 SYNPOQ8N3V7 929 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 DAGLBQ8NCG7 672 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 CHFRQ96EP1 664 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 ZNF512Q96ME7 567 aaPredicted RBP12.34□□□□□ -0.43
RNF4-218ENST00000513284 AIFM3Q96NN9 605 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 AGXT2Q9BYV1 514 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 POLR3FQ9H1D9 316 aaPredicted RBP12.34□□□□□ -0.43
RNF4-218ENST00000513284 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 FBXL5Q9UKA1 691 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 GDAQ9Y2T3 454 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 TRIP11Q15643 1979 aa12.34□□□□□ -0.43
RNF4-218ENST00000513284 DGAT1O75907 488 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 PRKCBP05771 671 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 RARRES1P49788 294 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 CCT2P78371 535 aaKnown RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 TNK2Q07912 1038 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 TWF1Q12792 350 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 CDCA2Q69YH5 1023 aaPredicted RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 C1orf228Q6PIY5 440 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 ALKAL1Q6UXT8 129 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 CENPQQ7L2Z9 268 aaPredicted RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 MAEAQ7L5Y9 396 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 TMC8Q8IU68 726 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 FBXL16Q8N461 479 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 BSNDQ8WZ55 320 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 E2F7Q96AV8 911 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 PRIMPOLQ96LW4 560 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 FBRSL1Q9HCM7 1045 aaKnown RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
RNF4-218ENST00000513284 ATG2BQ96BY7 2078 aa12.33□□□□□ -0.44
RNF4-218ENST00000513284 BPTFQ12830 3046 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 LNP1A1A4G5 178 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 BCLAF3A2AJT9 711 aaKnown RBP12.32□□□□□ -0.44
RNF4-218ENST00000513284 LRRIQ4A6NIV6 560 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 N4BP3O15049 544 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 AKAP3O75969 853 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 CEACAM1P13688 526 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 EVCP57679 992 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 XKR4Q5GH76 650 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
RNF4-218ENST00000513284 TPGS2Q68CL5 300 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 IQCEQ6IPM2 695 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 FSTL4Q6MZW2 842 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 ZCCHC14Q8WYQ9 949 aaKnown RBP12.32□□□□□ -0.44
RNF4-218ENST00000513284 KCNB2Q92953 911 aa12.32□□□□□ -0.44
RNF4-218ENST00000513284 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms