RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 RGL1Q9NZL6 768 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 AFF4Q9UHB7 1163 aaKnown RBP4.48□□□□□ -1.69
VCAN-209ENST00000513016 PCSK1NQ9UHG2 260 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 NRBP1Q9UHY1 535 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 TEKT2Q9UIF3 430 aa4.48□□□□□ -1.69
VCAN-209ENST00000513016 TNS2Q63HR2 1409 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 NDUFS2O75306 463 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 FGF19O95750 216 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PSMA3P25788 255 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 HADHAP40939 763 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 GUCY2DQ02846 1103 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 RBL2Q08999 1139 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PPIGQ13427 754 aaKnown RBP eCLIP4.47□□□□□ -1.69
VCAN-209ENST00000513016 PIGHQ14442 188 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 PTGISQ16647 500 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ACAD11Q709F0 780 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 TLK2Q86UE8 772 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ZNF410Q86VK4 478 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PDZD8Q8NEN9 1154 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 RAPGEF5Q92565 580 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 APBA2Q99767 749 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 CINPQ9BW66 212 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 NIF3L1Q9GZT8 377 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 UPF3AQ9H1J1 476 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 SLC28A3Q9HAS3 691 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 EXOC1LA0A1B0GW35 172 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 GLTPD2A6NH11 291 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 SUN1O94901 812 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PDGFRAP16234 1089 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 VCAM1P19320 739 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 RPA1P27694 616 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 INPP5BP32019 993 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PCK1P35558 622 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ANXA11P50995 505 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 COPS2P61201 443 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ETF1P62495 437 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 IL1RL1Q01638 556 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 TGM3Q08188 693 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ILF2Q12905 390 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 PDK1Q15118 436 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 FSCBQ5H9T9 825 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 TRAPPC11Q7Z392 1133 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PATL1Q86TB9 770 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 UROC1Q96N76 676 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 IGFLR1Q9H665 355 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 KCNH7Q9NS40 1196 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PITPNM2Q9BZ72 1349 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 SALL1Q9NSC2 1324 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 CLTCL1P53675 1640 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 LGALS16A8MUM7 142 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 HNRNPCL2B2RXH8 293 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 HNRNPCL1O60812 293 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 MAP2K5Q13163 448 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 KIF19Q2TAC6 998 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 NBPF9Q3BBW0 867 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 CCDC144BQ3MJ40 725 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PCNX4Q63HM2 1172 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PTRHD1Q6GMV3 140 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 TXNRD3Q86VQ6 643 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 WDR75Q8IWA0 830 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 RCOR2Q8IZ40 523 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ASCC2Q9H1I8 757 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 FBXO44Q9H4M3 255 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 CYP4F11Q9HBI6 524 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 TLR8Q9NR97 1041 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 KLHL11Q9NVR0 708 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 NMRK1Q9NWW6 199 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 CDC23Q9UJX2 597 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 MST1RQ04912 1400 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 ADCY6O43306 1168 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 RTN2O75298 545 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 RTN3O95197 1032 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 ADORA2AP29274 412 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PLTPP55058 493 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 DR1Q01658 176 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 PKN3Q6P5Z2 889 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 NUP85Q9BW27 656 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 UNC45AQ9H3U1 944 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 MRPL17Q9NRX2 175 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 INTS9Q9NV88 658 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 AIPL1Q9NZN9 384 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 KANSL1LA0AUZ9 987 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 EIF4E1BA6NMX2 242 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 CYB561D2O14569 222 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 HOXA10P31260 410 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 SGCGQ13326 291 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 HP1BP3Q5SSJ5 553 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 ANKS6Q68DC2 871 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 TIGD7Q6NT04 549 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 CEP68Q76N32 757 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 NIPA1Q7RTP0 329 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 TBC1D1Q86TI0 1168 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 SMYD4Q8IYR2 804 aaPredicted RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 ATP8B4Q8TF62 1192 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 EML4Q9HC35 981 aaKnown RBP4.47□□□□□ -1.69
VCAN-209ENST00000513016 TMEM8AQ9HCN3 771 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 RRN3Q9NYV6 651 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 COPEO14579 308 aa4.47□□□□□ -1.69
VCAN-209ENST00000513016 HMOX2P30519 316 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms