RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 CALML4Q96GE6 196 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 IFT74Q96LB3 600 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 KCTD15Q96SI1 283 aaPredicted RBP9.14□□□□□ -0.95
SDHC-208ENST00000513009 GAD1Q99259 594 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 COLEC11Q9BWP8 271 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 FOXQ1Q9C009 403 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 IPPQ9Y573 584 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 NCOR2Q9Y618 2525 aa9.14□□□□□ -0.95
SDHC-208ENST00000513009 ZMYM2Q9UBW7 1377 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 KANSL1LA0AUZ9 987 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 ARL5CA6NH57 179 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 WIPF1O43516 503 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 SPATA31D3P0C874 917 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 AXLP30530 894 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 TXLNAP40222 546 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 MLH1P40692 756 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 UBA7P41226 1012 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 MAGEA9P43362 315 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 NPEPPSP55786 919 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 GPC5P78333 572 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PRKCQQ04759 706 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 EMC2Q15006 297 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
SDHC-208ENST00000513009 USP41Q3LFD5 358 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 FUT10Q6P4F1 479 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 RSPO2Q6UXX9 243 aaPredicted RBP9.13□□□□□ -0.95
SDHC-208ENST00000513009 SPATA31D4Q6ZUB0 917 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 APBB1IPQ7Z5R6 666 aaPredicted RBP9.13□□□□□ -0.95
SDHC-208ENST00000513009 CATSPER3Q86XQ3 398 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PALB2Q86YC2 1186 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 ZBTB8OSQ8IWT0 167 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 SNX29Q8TEQ0 813 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PRPF31Q8WWY3 499 aaKnown RBP9.13□□□□□ -0.95
SDHC-208ENST00000513009 AK8Q96MA6 479 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 ZNF396Q96N95 335 aaPredicted RBP9.13□□□□□ -0.95
SDHC-208ENST00000513009 CNTNAP3BQ96NU0 1288 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 HSD17B14Q9BPX1 270 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 BCO2Q9BYV7 579 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 CNTNAP3Q9BZ76 1288 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 CDH7Q9ULB5 785 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 GIT1Q9Y2X7 761 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PCDHB6Q9Y5E3 794 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 PCDHGA2Q9Y5H1 932 aa9.13□□□□□ -0.95
SDHC-208ENST00000513009 GPR179Q6PRD1 2367 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 SOBPA7XYQ1 873 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 PRR5-ARHGAP8B1AHC4 643 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 F8W810 466 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 LAMTOR5O43504 91 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 SLC26A4O43511 780 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 TSPAN1O60635 241 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 LRRN2O75325 713 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 HNRNPA1P09651 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
SDHC-208ENST00000513009 MYBP10242 640 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 HOXA9P31269 272 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 SCNN1GP51170 649 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 ARHGAP8P85298 464 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 PFKPQ01813 784 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 SF3A1Q15459 793 aaKnown RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 MLF2Q15773 248 aaPredicted RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 PPP1R26Q5T8A7 1209 aaPredicted RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 NOTUMQ6P988 496 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 PARM1Q6UWI2 310 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 MTSS1LQ765P7 747 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 RNF149Q8NC42 400 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 ZBTB44Q8NCP5 570 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 GSTCDQ8NEC7 633 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 NELL1Q92832 810 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 FGF14Q92915 247 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 TMEM143Q96AN5 459 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 RPP25Q9BUL9 199 aaKnown RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 EIF2AQ9BY44 585 aaKnown RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 GPR62Q9BZJ7 368 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 TRIM6Q9C030 488 aaPredicted RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 CSRNP2Q9H175 543 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 C2orf40Q9H1Z8 148 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 TMEM60Q9H2L4 133 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 SPATA6Q9NWH7 488 aaPredicted RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 MIOSQ9NXC5 875 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 NCDNQ9UBB6 729 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 CCDC39Q9UFE4 941 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 FBXW11Q9UKB1 542 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 ADAM28Q9UKQ2 775 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
SDHC-208ENST00000513009 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
SDHC-208ENST00000513009 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
SDHC-208ENST00000513009 PHLPP2Q6ZVD8 1323 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 DMXL1Q9Y485 3027 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 DNAH14Q0VDD8 3507 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 NOTCH4Q99466 2003 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 TPRP12270 2363 aaKnown RBP9.11□□□□□ -0.95
SDHC-208ENST00000513009 VWA3AA6NCI4 1184 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 INO80B-WBP1J3KQ70 363 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 STX6O43752 255 aa9.11□□□□□ -0.95
SDHC-208ENST00000513009 USO1O60763 962 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms