RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 SLC8B1Q6J4K2 584 aa17.53■□□□□ 0.4
DDR1-269ENST00000512725 Q6ZS52 159 aa17.53■□□□□ 0.4
DDR1-269ENST00000512725 APBB1IPQ7Z5R6 666 aaPredicted RBP17.53■□□□□ 0.4
DDR1-269ENST00000512725 MFSD6LQ8IWD5 586 aa17.53■□□□□ 0.4
DDR1-269ENST00000512725 TCEAL8Q8IYN2 117 aa17.53■□□□□ 0.4
DDR1-269ENST00000512725 ARRDC1-AS1Q9H2J1 176 aa17.53■□□□□ 0.4
DDR1-269ENST00000512725 PDRG1Q9NUG6 133 aa17.53■□□□□ 0.4
DDR1-269ENST00000512725 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.4
DDR1-269ENST00000512725 SMIM28A0A1B0GU29 152 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 ARHGEF35A5YM69 484 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 PODXLO00592 558 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 FOXD2O60548 495 aaPredicted RBP17.52■□□□□ 0.4
DDR1-269ENST00000512725 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDR1-269ENST00000512725 CPB1P15086 417 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 FOSBP53539 338 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 SCRN1Q12765 414 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 IFT74Q96LB3 600 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 CEP72Q9P209 647 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 FBXL5Q9UKA1 691 aa17.52■□□□□ 0.4
DDR1-269ENST00000512725 MICAL2O94851 1124 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 COL4A2P08572 1712 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 NAMPTP43490 491 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 SOX4Q06945 474 aaPredicted RBP17.51■□□□□ 0.39
DDR1-269ENST00000512725 PPP2R5AQ15172 486 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 NT5DC1Q5TFE4 455 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 PADI6Q6TGC4 694 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 NACC1Q96RE7 527 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
DDR1-269ENST00000512725 CCDC113Q9H0I3 377 aa17.51■□□□□ 0.39
DDR1-269ENST00000512725 C8orf33Q9H7E9 229 aaPredicted RBP17.51■□□□□ 0.39
DDR1-269ENST00000512725 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
DDR1-269ENST00000512725 NCANO14594 1321 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 STK36Q9NRP7 1315 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 USP24Q9UPU5 2620 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 K7ESF4 209 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 DPYSL4O14531 572 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 SYN3O14994 580 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 MED24O75448 989 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 SPATA31C1P0DKV0 1188 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 HOXC13P31276 330 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 MCM4P33991 863 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 PON2Q15165 354 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 TPGS2Q68CL5 300 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 ZNF280DQ6N043 979 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 CATSPER3Q86XQ3 398 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 CEP120Q8N960 986 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 TOPORSQ9NS56 1045 aaPredicted RBP17.5■□□□□ 0.39
DDR1-269ENST00000512725 SLC38A7Q9NVC3 462 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 C2orf42Q9NWW7 574 aa17.5■□□□□ 0.39
DDR1-269ENST00000512725 A0A1W2PRU2 124 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 MOSPD3O75425 235 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
DDR1-269ENST00000512725 PMLP29590 882 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 MARCKSP29966 332 aaPredicted RBP17.49■□□□□ 0.39
DDR1-269ENST00000512725 PXNP49023 591 aaPredicted RBP17.49■□□□□ 0.39
DDR1-269ENST00000512725 ZNF568Q3ZCX4 644 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 RNF19BQ6ZMZ0 732 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
DDR1-269ENST00000512725 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 WASF1Q92558 559 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 E2F7Q96AV8 911 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 ZFYVE19Q96K21 471 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 TUFT1Q9NNX1 390 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 AFF4Q9UHB7 1163 aaKnown RBP17.49■□□□□ 0.39
DDR1-269ENST00000512725 SDK1Q7Z5N4 2213 aa17.49■□□□□ 0.39
DDR1-269ENST00000512725 SPECC1L-ADORA2AF8WAN1 911 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 K7ERI5 159 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 WNT7AO00755 349 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 CHADO15335 359 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 NEFLP07196 543 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 CCDC192P0DO97 292 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 CYP11B2P19099 503 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 MCM7P33993 719 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 EFNA5P52803 228 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 DGKKQ5KSL6 1271 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 WDR5BQ86VZ2 330 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 SHKBP1Q8TBC3 707 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 RSPRY1Q96DX4 576 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 TCHPQ9BT92 498 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 GPR88Q9GZN0 384 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 SMOC1Q9H4F8 434 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 TRPV4Q9HBA0 871 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 SH2B1Q9NRF2 756 aaPredicted RBP17.48■□□□□ 0.39
DDR1-269ENST00000512725 RXFP3Q9NSD7 469 aa17.48■□□□□ 0.39
DDR1-269ENST00000512725 CCDC169A6NNP5 214 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 GRM5P41594 1212 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 STPG1Q5TH74 334 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 TXNDC11Q6PKC3 985 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 HAUS6Q7Z4H7 955 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 APPL2Q8NEU8 664 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 ERMNQ8TAM6 284 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 C18orf25Q96B23 403 aaPredicted RBP17.47■□□□□ 0.39
DDR1-269ENST00000512725 ZMAT2Q96NC0 199 aaKnown RBP17.47■□□□□ 0.39
DDR1-269ENST00000512725 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 CDT1Q9H211 546 aa17.47■□□□□ 0.39
DDR1-269ENST00000512725 TMEM60Q9H2L4 133 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms