RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 TBXAS1P24557 533 aaPredicted RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 POLR2BP30876 1174 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 RPL9P32969 192 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 YWHAEP62258 255 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 TUSC3Q13454 348 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 ZBTB6Q15916 424 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 PPM1KQ8N3J5 372 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 LRRC52Q8N7C0 313 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 ZMAT2Q96NC0 199 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 PPP1R10Q96QC0 940 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 SPAG5Q96R06 1193 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 ZNHIT6Q9NWK9 470 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 TUBGCP4Q9UGJ1 667 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
PFDN1-204ENST00000512707 LUC7L2Q9Y383 392 aaKnown RBP11.68□□□□□ -0.54
PFDN1-204ENST00000512707 CITO14578 2027 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 MEIS3P2A8K0S8 358 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 AKR1B15C9JRZ8 316 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 SOX1O00570 391 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 UPP2O95045 317 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 VNN1O95497 513 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 STAU1O95793 577 aaKnown RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 ASS1P00966 412 aaKnown RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 CCDC172P0C7W6 258 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 UCHL3P15374 230 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 MYL6P60660 151 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 POLR2FP61218 127 aaKnown RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 TNNC1P63316 161 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 KCNMA1Q12791 1236 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 LRMPQ12912 555 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 RAPGEF1Q13905 1077 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 SV2CQ496J9 727 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 ZNF667Q5HYK9 610 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 CLLU1OSQ5K130 101 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 KLHDC7AQ5VTJ3 777 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 LRRC43Q8N309 656 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 TTC39CQ8N584 583 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 CPLX3Q8WVH0 158 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 C18orf25Q96B23 403 aaPredicted RBP11.67□□□□□ -0.54
PFDN1-204ENST00000512707 HPDLQ96IR7 371 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 FAXDC2Q96IV6 333 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 PDLIM2Q96JY6 352 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 A0A0C4DFX4 3053 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
PFDN1-204ENST00000512707 LRPAP1P30533 357 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 TAF6P49848 677 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 KLK7P49862 253 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 ZBED6P86452 979 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 GCNT1Q02742 428 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 PTPN21Q16825 1174 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 C9orf57Q5W0N0 161 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 SMYD5Q6GMV2 418 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
PFDN1-204ENST00000512707 SEMA4DQ92854 862 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 JAKMIP2Q96AA8 810 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 SLC9A7Q96T83 725 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 YME1L1Q96TA2 773 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 ZBED2Q9BTP6 218 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 FAM124BQ9H5Z6 455 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-204ENST00000512707 UBE2TQ9NPD8 197 aaPredicted RBP11.66□□□□□ -0.54
PFDN1-204ENST00000512707 TBC1D13Q9NVG8 400 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 SIX4Q9UIU6 781 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 DNAJC12Q9UKB3 198 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 MYO6Q9UM54 1294 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 CAPN11Q9UMQ6 739 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 NUB1Q9Y5A7 615 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 SLC4A7Q9Y6M7 1214 aa11.66□□□□□ -0.54
PFDN1-204ENST00000512707 ANO9A1A5B4 782 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 DLL1O00548 723 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 PODXLO00592 558 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 MFAP3LO75121 409 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 CST3P01034 146 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-204ENST00000512707 GYPCP04921 128 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 CASP14P31944 242 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 KRT9P35527 623 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 GUCY2FP51841 1108 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 TBX2Q13207 712 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-204ENST00000512707 CUL2Q13617 745 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 WDR72Q3MJ13 1102 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 RRAGAQ7L523 313 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 GSTCDQ8NEC7 633 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 OR8K1Q8NGG5 319 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 LMO3Q8TAP4 145 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
PFDN1-204ENST00000512707 FAM84AQ96KN4 292 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms