RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CDC45O75419 566 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 GJA1P17302 382 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 IGFBP6P24592 240 aaPredicted RBP13.81□□□□□ -0.2
DDX41-215ENST00000512431 HSPA4P34932 840 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 YARSP54577 528 aaKnown RBP13.81□□□□□ -0.2
DDX41-215ENST00000512431 TWF1Q12792 350 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 CTXN3Q4LDR2 81 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 RNF43Q68DV7 783 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 PSAPL1Q6NUJ1 521 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 GOLGA2P5Q9HBQ8 144 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 VPS45Q9NRW7 570 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 TOPORSQ9NS56 1045 aaPredicted RBP13.81□□□□□ -0.2
DDX41-215ENST00000512431 RXFP3Q9NSD7 469 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 SLC38A7Q9NVC3 462 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 NUB1Q9Y5A7 615 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 PCDHGA5Q9Y5G8 931 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 RALGAPA1Q6GYQ0 2036 aa13.81□□□□□ -0.2
DDX41-215ENST00000512431 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 CCDC163A0A0D9SF12 145 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 MYBPHLA2RUH7 354 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 SOX9P48436 509 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 TEAD2Q15562 447 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 CALCRLQ16602 461 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 CD300LGQ6UXG3 332 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
DDX41-215ENST00000512431 AFF4Q9UHB7 1163 aaKnown RBP13.8□□□□□ -0.2
DDX41-215ENST00000512431 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 VWA8A3KMH1 1905 aa13.8□□□□□ -0.2
DDX41-215ENST00000512431 A0A087WWV3 80 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 SMIM28A0A1B0GU29 152 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 TMEM8BA6NDV4 472 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 PODXLO00592 558 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 ATG13O75143 517 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 MOSPD3O75425 235 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 CDKL5O76039 1030 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 CPB1P15086 417 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 CTHP32929 405 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 MPLP40238 635 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 NAMPTP43490 491 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 RAP1GAPP47736 663 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 NOVA1P51513 510 aaKnown RBP13.79□□□□□ -0.2
DDX41-215ENST00000512431 EPHA5P54756 1037 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 FCHO2Q0JRZ9 810 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 STK3Q13188 491 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 PON2Q15165 354 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 PPP2R5AQ15172 486 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 PTPAQ15257 358 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 ZNF280DQ6N043 979 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 KDF1Q8NAX2 398 aaPredicted RBP13.79□□□□□ -0.2
DDX41-215ENST00000512431 APPL2Q8NEU8 664 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 ZNF274Q96GC6 653 aaPredicted RBP13.79□□□□□ -0.2
DDX41-215ENST00000512431 CCDC94Q9BW85 323 aaPredicted RBP13.79□□□□□ -0.2
DDX41-215ENST00000512431 CEP72Q9P209 647 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 SLC8A2Q9UPR5 921 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 USP20Q9Y2K6 914 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 TICRRQ7Z2Z1 1910 aa13.79□□□□□ -0.2
DDX41-215ENST00000512431 A0A1W2PRU2 124 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 AKAP3O75969 853 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 MARCKSP29966 332 aaPredicted RBP13.78□□□□□ -0.2
DDX41-215ENST00000512431 TXKP42681 527 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 EFNA5P52803 228 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 FOXC1Q12948 553 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 PLD1Q13393 1074 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
DDX41-215ENST00000512431 PLA2G2CQ5R387 149 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 DAB2IPQ5VWQ8 1189 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 TXNDC11Q6PKC3 985 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 SHKBP1Q8TBC3 707 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 C2orf42Q9NWW7 574 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 COL4A2P08572 1712 aa13.78□□□□□ -0.2
DDX41-215ENST00000512431 BAHCC1Q9P281 2608 aa13.77□□□□□ -0.2
DDX41-215ENST00000512431 HOXB3P14651 431 aaPredicted RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 MCM4P33991 863 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 PXNP49023 591 aaPredicted RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 EPHB3P54753 998 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 CCINQ13939 588 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 ELF2Q15723 593 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 ARID3BQ8IVW6 561 aaPredicted RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 ZC3H10Q96K80 434 aaKnown RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 NACC1Q96RE7 527 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 EDEM2Q9BV94 578 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 CCDC113Q9H0I3 377 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 SMOC1Q9H4F8 434 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 BRMS1Q9HCU9 246 aa13.77□□□□□ -0.21
DDX41-215ENST00000512431 THG1LQ9NWX6 298 aaKnown RBP13.77□□□□□ -0.21
DDX41-215ENST00000512431 GTSE1Q9NYZ3 720 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms