RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CCDC194A0A1B0GVG4 234 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 hCG_1984214I3L0E3 225 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 PRRG1O14668 218 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 BCKDHBP21953 392 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 EPHA5P54756 1037 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 ELAVL2Q12926 359 aaKnown RBP10.12□□□□□ -0.79
NUP54-211ENST00000512151 CYP4A22Q5TCH4 519 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 PMS2CLQ68D20 193 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 TCEAL8Q8IYN2 117 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 TMTC2Q8N394 836 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 ZNF713Q8N859 430 aaPredicted RBP10.12□□□□□ -0.79
NUP54-211ENST00000512151 ZNF461Q8TAF7 563 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 FAM200AQ8TCP9 573 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 JPH2Q9BR39 696 aaPredicted RBP10.12□□□□□ -0.79
NUP54-211ENST00000512151 TRIM6Q9C030 488 aaPredicted RBP10.12□□□□□ -0.79
NUP54-211ENST00000512151 GLT8D2Q9H1C3 349 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 CYP4F11Q9HBI6 524 aa10.12□□□□□ -0.79
NUP54-211ENST00000512151 INO80B-WBP1J3KQ70 363 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 EML1O00423 815 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 EGFP01133 1207 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 PRKCBP05771 671 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 MCM5P33992 734 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 MAPK8P45983 427 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 BRCC3P46736 316 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 ARPP19P56211 112 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 SEMA3BQ13214 749 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 TMEM196Q5HYL7 178 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 NAIF1Q69YI7 327 aaPredicted RBP10.11□□□□□ -0.79
NUP54-211ENST00000512151 SLC8B1Q6J4K2 584 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 REXO1Q8N1G1 1221 aaKnown RBP10.11□□□□□ -0.79
NUP54-211ENST00000512151 CAMKK1Q8N5S9 505 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 C3orf58Q8NDZ4 430 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 ASAP3Q8TDY4 903 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 SLC7A3Q8WY07 619 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 TMEM87BQ96K49 555 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 CEP170P1Q96L14 293 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 TMEM209Q96SK2 561 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 LRRC3Q9BY71 257 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 ZMYND12Q9H0C1 365 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 SLC32A1Q9H598 525 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 CCDC86Q9H6F5 360 aaKnown RBP10.11□□□□□ -0.79
NUP54-211ENST00000512151 FBRSL1Q9HCM7 1045 aaKnown RBP10.11□□□□□ -0.79
NUP54-211ENST00000512151 XPNPEP1Q9NQW7 623 aa10.11□□□□□ -0.79
NUP54-211ENST00000512151 SHROOM3Q8TF72 1996 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 PI4KAP42356 2102 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 ESYT2A0FGR8 921 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 ZBTB39O15060 712 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 RNF40O75150 1001 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 ATF2P15336 505 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 GBP1P32455 592 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 ELF1P32519 619 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 PSMC5P62195 406 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 TWF1Q12792 350 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 EMC2Q15006 297 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 SLC27A1Q6PCB7 646 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 APOA5Q6Q788 366 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 CCNI2Q6ZMN8 369 aaPredicted RBP10.1□□□□□ -0.79
NUP54-211ENST00000512151 CYP2U1Q7Z449 544 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 IFNLR1Q8IU57 520 aaPredicted RBP10.1□□□□□ -0.79
NUP54-211ENST00000512151 ARID3BQ8IVW6 561 aaPredicted RBP10.1□□□□□ -0.79
NUP54-211ENST00000512151 HACE1Q8IYU2 909 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 DAGLBQ8NCG7 672 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 PIGKQ92643 395 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 SLITRK6Q9H5Y7 841 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 FSCN3Q9NQT6 498 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 MBD1Q9UIS9 605 aaPredicted RBP10.1□□□□□ -0.79
NUP54-211ENST00000512151 BRPF3Q9ULD4 1205 aa10.1□□□□□ -0.79
NUP54-211ENST00000512151 KALRNO60229 2985 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 A0A1B0GUA9 196 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 A0A1W2PRU2 124 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 OTOL1A6NHN0 477 aaPredicted RBP10.09□□□□□ -0.79
NUP54-211ENST00000512151 UPK3BL1B0FP48 263 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 UPK3BL2E5RIL1 263 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 H0Y626 953 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 TMEM189-UBE2V1I3L0A0 370 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 ASAP2O43150 1006 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 TRIM16O95361 564 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 PRAMEF12O95522 483 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 THP07101 528 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 CDC27P30260 824 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 CAPSQ13938 189 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 KARSQ15046 597 aaKnown RBP10.09□□□□□ -0.79
NUP54-211ENST00000512151 RTN1Q16799 776 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 PFKFB3Q16875 520 aaPredicted RBP10.09□□□□□ -0.79
NUP54-211ENST00000512151 ANKS3Q6ZW76 656 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 SGMS1Q86VZ5 419 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 TMC8Q8IU68 726 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 E2F7Q96AV8 911 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 ZNF512Q96ME7 567 aaPredicted RBP10.09□□□□□ -0.79
NUP54-211ENST00000512151 ASAH2Q9NR71 780 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 EVLQ9UI08 416 aaPredicted RBP10.09□□□□□ -0.79
NUP54-211ENST00000512151 RAI2Q9Y5P3 530 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 RBM8AQ9Y5S9 174 aaKnown RBP10.09□□□□□ -0.79
NUP54-211ENST00000512151 SPTA1P02549 2419 aa10.09□□□□□ -0.79
NUP54-211ENST00000512151 ADAMTS9Q9P2N4 1935 aa10.08□□□□□ -0.8
NUP54-211ENST00000512151 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
NUP54-211ENST00000512151 TNRC6BQ9UPQ9 1833 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms