RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	AGAP1	Q9UPQ3	857 aa		15.72	■□□□□ 0.11
MATR3-238	ENST00000512107	PCDHGC5	Q9Y5F6	944 aa		15.72	■□□□□ 0.11
MATR3-238	ENST00000512107	TSC2	P49815	1807 aa		15.72	■□□□□ 0.11
MATR3-238	ENST00000512107	HLA-DRA	P01903	254 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	KRT13	P13646	458 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	CTNNB1	P35222	781 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	MYL6	P60660	151 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	KCNH2	Q12809	1159 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	HSP90AA2P	Q14568	343 aa	Predicted RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	RAB30	Q15771	203 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	TPD52L1	Q16890	204 aa	Predicted RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	DUOXA2	Q1HG44	320 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	TIGD5	Q53EQ6	642 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	SPOUT1	Q5T280	376 aa	Known RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	TCERG1L	Q5VWI1	586 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	SPOPL	Q6IQ16	392 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	RNF168	Q8IYW5	571 aa	Predicted RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	BEST2	Q8NFU1	509 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	LMO3	Q8TAP4	145 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	FAM200A	Q8TCP9	573 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	IGSF21	Q96ID5	467 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	ZNF558	Q96NG5	402 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	FAM193B	Q96PV7	902 aa	Predicted RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	ALG13	Q9NP73	1137 aa	Known RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	LIMA1	Q9UHB6	759 aa	Known RBP	15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	MSRA	Q9UJ68	235 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	POLI	Q9UNA4	740 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	FAN1	Q9Y2M0	1017 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	NME7	Q9Y5B8	376 aa		15.71	■□□□□ 0.11
MATR3-238	ENST00000512107	GRM6	O15303	877 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	LPXN	O60711	386 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	TMEM191B	P0C7N4	346 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	LAG3	P18627	525 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	MTIF2	P46199	727 aa	Known RBP	15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	FMO5	P49326	533 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	ENPEP	Q07075	957 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	SURF1	Q15526	300 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	PPP2R2D	Q66LE6	453 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	SPPL3	Q8TCT6	385 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	GDPD5	Q8WTR4	605 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	ARNTL2	Q8WYA1	636 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	ANKRD36BP1	Q96IX9	119 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	NAP1L5	Q96NT1	182 aa	Predicted RBP	15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	TUBGCP2	Q9BSJ2	902 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	VPS16	Q9H269	839 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	METTL14	Q9HCE5	456 aa	Known RBP	15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	TMEM8A	Q9HCN3	771 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	SLC38A7	Q9NVC3	462 aa		15.7	■□□□□ 0.1
MATR3-238	ENST00000512107	C5orf67	F2Z3F1	127 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	HCRT	O43612	131 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	FGF18	O76093	207 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	CSPG5	O95196	566 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	GNA14	O95837	355 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	TNNC2	P02585	160 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	ALDH2	P05091	517 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	KRT19	P08727	400 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	AARS	P49588	968 aa	Known RBP eCLIP	15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	KLK7	P49862	253 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	COPB1	P53618	953 aa	Known RBP	15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	LILRA4	P59901	499 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	KCNMA1	Q12791	1236 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	DCLRE1A	Q6PJP8	1040 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	NT5DC4	Q86YG4	428 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	AUTS2	Q8WXX7	1259 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	TATDN2	Q93075	761 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	TGS1	Q96RS0	853 aa	Known RBP	15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	TSPAN18	Q96SJ8	248 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	NAT10	Q9H0A0	1025 aa	Known RBP	15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	SDCBP2	Q9H190	292 aa		15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	AJAP1	Q9UKB5	411 aa	Predicted RBP	15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	15.69	■□□□□ 0.1
MATR3-238	ENST00000512107	TMEM189-UBE2V1	I3L0A0	370 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	TEX33	O43247	280 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	B3GAT3	O94766	335 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	FGFR1OP	O95684	399 aa	Known RBP	15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	RPL9	P32969	192 aa	Known RBP	15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	IRS1	P35568	1242 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	MXI1	P50539	228 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	ERVFC1	P60507	584 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	BIRC3	Q13489	604 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	NCOA4	Q13772	614 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	GRIN2C	Q14957	1233 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	MAN2A1	Q16706	1144 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	VWA3B	Q502W6	1294 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107		Q7L0L9	218 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	OSTM1	Q86WC4	334 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	CACTIN	Q8WUQ7	758 aa	Known RBP	15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	UROC1	Q96N76	676 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	CRACR2A	Q9BSW2	395 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	ZNF576	Q9H609	170 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	SPG21	Q9NZD8	308 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	ADAM28	Q9UKQ2	775 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	ITGA11	Q9UKX5	1188 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	COQ4	Q9Y3A0	265 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	NUB1	Q9Y5A7	615 aa		15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	TIMM13	Q9Y5L4	95 aa	Predicted RBP	15.68	■□□□□ 0.1
MATR3-238	ENST00000512107	LRRC10B	A6NIK2	292 aa		15.67	■□□□□ 0.1
MATR3-238	ENST00000512107	SMTNL1	A8MU46	457 aa		15.67	■□□□□ 0.1
MATR3-238	ENST00000512107	AFP	P02771	609 aa	Known RBP	15.67	■□□□□ 0.1
MATR3-238	ENST00000512107	SLC9A1	P19634	815 aa		15.67	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms